RNA id: TU256571


Basic Information

Item Value
RNA id TU256571
length 287
lncRNA type intronic
GC content 0.41
exon number 2
gene id G189345
representative False

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 33890507 ~ 33892450 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ctggtgtagttaaggtgtaaagctcctggttatagtatatatcttggtcactggtgtagttaaggtgtagagctcctggttatagtatatctattggtcaccggtgtagttaaggtgtagagctcctggttatagtatatatcttggtcactggtgtagttaaggtgtagagctcctggttatagtatatctattggtcaccggtgtagttaaggtgtagagctcctggttatagtatatatattggtcaccggtgtagttaaggtgtagagctcctggttatagta

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU256563 lncRNA upstream 5509 33839721 ~ 33884998 (+) True G189339
TU256568 lncRNA upstream 14060 33863205 ~ 33876447 (+) True G189344
TU256566 lncRNA upstream 35038 33853678 ~ 33855469 (+) False LOC120546446
TU256546 lncRNA upstream 58904 33760348 ~ 33831603 (+) False G189327
TU256499 lncRNA downstream 18235 33910022 ~ 33943562 (+) False G189294
TU256580 lncRNA downstream 46268 33938055 ~ 33938349 (+) True G189352
TU256710 lncRNA downstream 154824 34046611 ~ 34047007 (+) True G189439
XR_005636834.1 lncRNA downstream 177814 34069601 ~ 34071742 (+) True LOC120546208
XR_005637028.1 lncRNA downstream 188472 34080259 ~ 34096714 (+) True LOC120547081
XM_039781373.1 mRNA upstream 34095 33846444 ~ 33856412 (+) True LOC120546446
XM_039781371.1 mRNA upstream 119105 33765353 ~ 33771402 (+) True LOC120546444
XM_039780949.1 mRNA upstream 224254 33629800 ~ 33666253 (+) True LOC120546181
XM_039780971.1 mRNA upstream 474421 33399801 ~ 33416086 (+) True LOC120546192
XM_039782542.1 mRNA upstream 503518 33328092 ~ 33386989 (+) False pex7
XM_039781947.1 mRNA downstream 116609 34008396 ~ 34013448 (+) False LOC120546767
XM_039781946.1 mRNA downstream 119153 34010940 ~ 34013448 (+) True LOC120546767
XM_039781374.1 mRNA downstream 126844 34018631 ~ 34035953 (+) True LOC120546447
XM_039782426.1 mRNA downstream 145269 34037056 ~ 34052641 (+) True LOC120547053
XM_039782425.1 mRNA downstream 146775 34038562 ~ 34052641 (+) False LOC120547053
TU256516 other upstream 30104 33859146 ~ 33860403 (+) False LOC120546766
TU256542 other upstream 119134 33765501 ~ 33771373 (+) False LOC120546444
XR_005637066.1 other upstream 126881 33763465 ~ 33763626 (+) True LOC120547364
TU256525 other upstream 204951 33641620 ~ 33685556 (+) True G189309
TU256470 other upstream 431739 33453996 ~ 33458768 (+) True G189269
TU256522 other downstream 40277 33932064 ~ 33939387 (+) True G189307
TU256520 other downstream 73796 33965583 ~ 33986476 (+) True G189305
TU256875 other downstream 571121 34462908 ~ 34464897 (+) True G189544
TU256872 other downstream 591077 34482864 ~ 34503755 (+) True G189541
TU256921 other downstream 594637 34486424 ~ 34487177 (+) True G189570

Expression Profile