RNA id: TU256853



Basic Information


Item Value
RNA id TU256853
length 516
lncRNA type sense_over
GC content 0.49
exon number 3
gene id G189535
representative False

Chromosome Information


Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 34394786 ~ 34438684 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


tgaaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagctacacacacacacacacacaacacacagcacagacattctgcacacacacacacataaacacacaaacacacacacacacacacacacagctacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagccacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagctacacacacacacacacacacagttacagacacagctacacacacacacacacaaacacagaaacacacacacagacacacacacacagagacacacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacacagagacacacacacagac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_005636883.1 lncRNA upstream 59458 34333258 ~ 34335328 (+) True LOC120546564
TU256746 lncRNA upstream 112111 34282045 ~ 34282675 (+) False G189467
TU256913 lncRNA downstream 9181 34447865 ~ 34448686 (+) False LOC120546451
TU256908 lncRNA downstream 14784 34453468 ~ 34455344 (+) False LOC120546451
TU256910 lncRNA downstream 17943 34456627 ~ 34457292 (+) True G189560
TU256881 lncRNA downstream 22985 34461669 ~ 34517856 (+) True G189550
TU256919 lncRNA downstream 45192 34483876 ~ 34562252 (+) True G189568
XM_039781723.1 mRNA upstream 21284 34360125 ~ 34373502 (+) False LOC120546638
XM_039781778.1 mRNA downstream 76138 34514822 ~ 34527646 (+) True LOC120546659
XM_039781382.1 mRNA downstream 92704 34531388 ~ 34540087 (+) True LOC120546454
XM_039781801.1 mRNA downstream 121248 34559932 ~ 34571848 (+) True LOC120546680
XM_039781383.1 mRNA downstream 145363 34584047 ~ 34595606 (+) True LOC120546456
XM_039781793.1 mRNA downstream 183372 34622056 ~ 34624173 (+) True LOC120546672
TU256520 other upstream 408310 33965583 ~ 33986476 (+) True G189305
TU256522 other upstream 455399 33932064 ~ 33939387 (+) True G189307
TU256516 other upstream 534383 33859146 ~ 33860403 (+) False LOC120546766
TU256542 other upstream 623413 33765501 ~ 33771373 (+) False LOC120546444
XR_005637066.1 other upstream 631160 33763465 ~ 33763626 (+) True LOC120547364
TU256875 other downstream 24224 34462908 ~ 34464897 (+) True G189544
TU256872 other downstream 44180 34482864 ~ 34503755 (+) True G189541
TU256921 other downstream 47740 34486424 ~ 34487177 (+) True G189570
XR_005637062.1 other downstream 80604 34519288 ~ 34519426 (+) True LOC120547360
XR_005637063.1 other downstream 86204 34524888 ~ 34525026 (+) True LOC120547361

Expression Profile