RNA id: TU256875


Basic Information

Item Value
RNA id TU256875
length 572
RNA type TUCP
GC content 0.58
exon number 2
gene id G189544
representative True

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 34462908 ~ 34464897 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TTGGACGTCGCGCGCGTGCGTTTGTTTACGaaatactacaaaataaaagcggAATACTTTGGATTAAAATGCTTTTGACACAAAACCCCGACATGAGGATTCCTTTAGACGCTGACTGGACGCTCCAAGCAGCACGCACGCGCCTCTAACAGCGCTGATATTTTGGGAACATTCCCGTCAGTATTTAGACTATACCTGtacctgttgtgtgtgtgtgtgtgtgtgtgtgtgtgtccgtgtgtgtccgcTCACCTGTGAGGACACATGTCTCATATGCACCACGCGGCTCCGGACCAGCACCATCCGGGCCAGTACAACCAGATCTGCACCGCGCACAGCAGCGCGGGGACAGAGCCGAGCTGCCCCGGCCAGAGGGACCGGAGCCCCCGCAGGAAGTGGCAGCTGTTCCCGGGGAGGAACCGGTTCTACTGCGACGGGAGGATCATGATGGCGAGGCAGACCGGAGTCTTCTACCTGACCCTGGTCCTCATCCTGCTCACCTGCGGCCTCTTCTTCACCTTCGACTGTCCCTTCCTGGCGTCCAGCCTGTCTCGGGCCATCCCTGCCGCGGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU256861 lncRNA upstream 5238 34409656 ~ 34457670 (+) True G189537
TU256910 lncRNA upstream 5616 34456627 ~ 34457292 (+) True G189560
TU256908 lncRNA upstream 7564 34453468 ~ 34455344 (+) False LOC120546451
TU256913 lncRNA upstream 14222 34447865 ~ 34448686 (+) False LOC120546451
TU256850 lncRNA upstream 24224 34394786 ~ 34438684 (+) False G189535
TU256919 lncRNA downstream 18979 34483876 ~ 34562252 (+) True G189568
TU256923 lncRNA downstream 28799 34493696 ~ 34494487 (+) True G189572
TU256879 lncRNA downstream 77770 34542667 ~ 34562894 (+) True G189548
TU256927 lncRNA downstream 79588 34544485 ~ 34546167 (+) True G189575
TU256928 lncRNA downstream 91901 34556798 ~ 34557154 (+) True G189576
XM_039781380.1 mRNA upstream 9113 34378500 ~ 34453795 (+) True LOC120546451
XM_039781725.1 mRNA upstream 89406 34357882 ~ 34373502 (+) False LOC120546638
XM_039781726.1 mRNA upstream 89406 34357882 ~ 34373502 (+) False LOC120546638
XM_039781722.1 mRNA upstream 89406 34360125 ~ 34373502 (+) False LOC120546638
XM_039781723.1 mRNA upstream 89406 34360125 ~ 34373502 (+) False LOC120546638
XM_039781778.1 mRNA downstream 49925 34514822 ~ 34527646 (+) True LOC120546659
XM_039781382.1 mRNA downstream 66491 34531388 ~ 34540087 (+) True LOC120546454
XM_039781801.1 mRNA downstream 95035 34559932 ~ 34571848 (+) True LOC120546680
XM_039781383.1 mRNA downstream 119150 34584047 ~ 34595606 (+) True LOC120546456
XM_039781793.1 mRNA downstream 157159 34622056 ~ 34624173 (+) True LOC120546672
TU256520 other upstream 476432 33965583 ~ 33986476 (+) True G189305
TU256522 other upstream 523521 33932064 ~ 33939387 (+) True G189307
TU256516 other upstream 602505 33859146 ~ 33860403 (+) False LOC120546766
TU256542 other upstream 691535 33765501 ~ 33771373 (+) False LOC120546444
XR_005637066.1 other upstream 699282 33763465 ~ 33763626 (+) True LOC120547364
TU256872 other downstream 17967 34482864 ~ 34503755 (+) True G189541
TU256921 other downstream 21527 34486424 ~ 34487177 (+) True G189570
XR_005637062.1 other downstream 54391 34519288 ~ 34519426 (+) True LOC120547360
XR_005637063.1 other downstream 59991 34524888 ~ 34525026 (+) True LOC120547361
TU256925 other downstream 66620 34531517 ~ 34538625 (+) False LOC120546454

Expression Profile