RNA id: TU256926



Basic Information


Item Value
RNA id TU256926
length 664
RNA type TUCP
GC content 0.56
exon number 5
gene id LOC120546454
representative False

Chromosome Information


Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 34531388 ~ 34585439 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TAAATAAGGAAGTAAACAAAAGTTAGGACTAGCTTCACGTTTCTGCTTTTCTGCTCCCAAAATGTCTGCAACAACGCCGAGACAGACGTTTTTAAACCCGGTGATCCCCTTCGCTGGGACGATCCTGGGCGGGCTGTTGCCGGGGGAGATGGTTCTCATCCAGGGCTCGGTGCCGTCTGATGCCGACAGGTTCCAGGTAGACTTCACGTGTGGCAGCAGCGTGAAGCCGCGAGCTGACGTGGCGTTCCACTTCAACCCGCGGTTCAGGAGGTCAGCGTGTGTCGTGTGCAACTCTCTGCAGAGCGAGCGCTGGGGCCGGGAGGAGGTCCTGCACGCCAAACCCTTCGCCGCCGGCGAGACGTTCGAACTCATCGTGCTCGTCCTCAAAGACGCGTttaagGTGGCGGTGAACGGAGCTCACGTTCTGGAGTACAAACACCGCGTGGATCTGGATCGGGTCGACACCCTGTCCATCTCTGGGAAGGTCCACGTGGGAGCTGTGGGCATCCTGGCCAACactgtgagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaacacacacacacacacacacacacacacacacaaacacacacacacctacacacacacagagacacacaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU256881 lncRNA upstream 13661 34461669 ~ 34517856 (+) True G189550
TU256886 lncRNA upstream 27974 34433979 ~ 34503543 (+) True G189553
TU256934 lncRNA downstream 584 34586023 ~ 34676086 (+) True G189580
TU256937 lncRNA downstream 1484 34586923 ~ 34681853 (+) False G189581
TU256893 lncRNA downstream 1639 34587078 ~ 34606143 (+) False G189555
TU256891 lncRNA downstream 1955 34587394 ~ 34606143 (+) False G189555
TU256880 lncRNA downstream 5483 34590922 ~ 34591590 (+) True G189549
XM_039781778.1 mRNA upstream 3871 34514822 ~ 34527646 (+) True LOC120546659
XM_039781380.1 mRNA upstream 77722 34378500 ~ 34453795 (+) True LOC120546451
XM_039781720.1 mRNA upstream 158015 34360126 ~ 34373502 (+) True LOC120546638
XM_039781793.1 mRNA downstream 36617 34622056 ~ 34624173 (+) True LOC120546672
XM_039781765.1 mRNA downstream 42039 34627478 ~ 34630935 (+) True LOC120546652
XM_039781767.1 mRNA downstream 194899 34780338 ~ 34795615 (+) False LOC120546653
XM_039781766.1 mRNA downstream 194902 34780341 ~ 34796403 (+) True LOC120546653
XM_039781384.1 mRNA downstream 218164 34803603 ~ 34827491 (+) True LOC120546458
XR_005637063.1 other upstream 6491 34524888 ~ 34525026 (+) True LOC120547361
XR_005637062.1 other upstream 12091 34519288 ~ 34519426 (+) True LOC120547360
TU256872 other upstream 27762 34482864 ~ 34503755 (+) True G189541
TU256921 other upstream 44340 34486424 ~ 34487177 (+) True G189570
TU256875 other upstream 66620 34462908 ~ 34464897 (+) True G189544
TU256888 other downstream 6998 34592437 ~ 34607338 (+) True G189555
TU256898 other downstream 6998 34592437 ~ 34607338 (+) False G189555
TU256938 other downstream 77576 34663015 ~ 34699244 (+) True G189582
TU257129 other downstream 238603 34824042 ~ 34825170 (+) False LOC120546458
TU257179 other downstream 424061 35009500 ~ 35010825 (+) True G189738

Expression Profile