RNA id: TU256928


Basic Information

Item Value
RNA id TU256928
length 216
lncRNA type inter_gene
GC content 0.44
exon number 2
gene id G189576
representative True

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 34556798 ~ 34557154 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ACAGGACATTAGTGCAATAATACACAACCATTCAAGGaatttgtacacacacacacacacacacacacacacacacacacacacacacacacacaaacacacacaaacaaacacagacacacacacacacacacacacagacagacacacacacaaacacacacacagacagacacacacacacacacacacacacacacacagacacacacaaac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU256927 lncRNA upstream 10631 34544485 ~ 34546167 (+) True G189575
TU256881 lncRNA upstream 38942 34461669 ~ 34517856 (+) True G189550
TU256886 lncRNA upstream 53255 34433979 ~ 34503543 (+) True G189553
TU256933 lncRNA downstream 20163 34577317 ~ 34582503 (+) True G189579
TU256934 lncRNA downstream 28869 34586023 ~ 34676086 (+) True G189580
TU256937 lncRNA downstream 29769 34586923 ~ 34681853 (+) False G189581
TU256893 lncRNA downstream 29924 34587078 ~ 34606143 (+) False G189555
TU256891 lncRNA downstream 30240 34587394 ~ 34606143 (+) False G189555
XM_039781382.1 mRNA upstream 16711 34531388 ~ 34540087 (+) True LOC120546454
XM_039781778.1 mRNA upstream 29152 34514822 ~ 34527646 (+) True LOC120546659
XM_039781380.1 mRNA upstream 103003 34378500 ~ 34453795 (+) True LOC120546451
XM_039781721.1 mRNA upstream 183296 34360126 ~ 34373502 (+) False LOC120546638
XM_039781801.1 mRNA downstream 2778 34559932 ~ 34571848 (+) True LOC120546680
XM_039781383.1 mRNA downstream 26893 34584047 ~ 34595606 (+) True LOC120546456
XM_039781793.1 mRNA downstream 64902 34622056 ~ 34624173 (+) True LOC120546672
XM_039781765.1 mRNA downstream 70324 34627478 ~ 34630935 (+) True LOC120546652
XM_039781767.1 mRNA downstream 223184 34780338 ~ 34795615 (+) False LOC120546653
TU256876 other upstream 4433 34549369 ~ 34552365 (+) True G189545
TU256925 other upstream 18173 34531517 ~ 34538625 (+) False LOC120546454
XR_005637063.1 other upstream 31772 34524888 ~ 34525026 (+) True LOC120547361
XR_005637062.1 other upstream 37372 34519288 ~ 34519426 (+) True LOC120547360
TU256872 other upstream 53043 34482864 ~ 34503755 (+) True G189541
TU256929 other downstream 7631 34564785 ~ 34610483 (+) True G189577
XR_005637064.1 other downstream 8315 34565469 ~ 34565607 (+) True LOC120547362
XR_005637065.1 other downstream 12802 34569956 ~ 34570094 (+) True LOC120547363
TU256888 other downstream 35283 34592437 ~ 34607338 (+) True G189555
TU256898 other downstream 35283 34592437 ~ 34607338 (+) False G189555

Expression Profile