RNA id: TU256931


Basic Information

Item Value
RNA id TU256931
length 219
lncRNA type read_through
GC content 0.49
exon number 2
gene id G189577
representative False

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 34564785 ~ 34645310 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gagagagagagagagagagagagagagagagagagacagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagacagagagagagagagagagagagagagagagagacagagagagagagagagagagagagagagagacacacacacaaacagagagagacacacacacaaacagag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005636921.1 lncRNA upstream 2879 34596185 ~ 34607342 (+) True LOC120546694
TU256892 lncRNA upstream 2883 34595660 ~ 34607338 (+) False G189555
TU256897 lncRNA upstream 2883 34595660 ~ 34607338 (+) False G189555
TU256900 lncRNA upstream 2883 34595660 ~ 34607338 (+) False G189555
TU256893 lncRNA upstream 4078 34587078 ~ 34606143 (+) False G189555
TU256952 lncRNA downstream 7918 34653228 ~ 34662076 (+) True G189589
TU256935 lncRNA downstream 35674 34680984 ~ 34681707 (+) True G189581
TU256943 lncRNA downstream 38703 34684013 ~ 34699122 (+) False G189582
TU256965 lncRNA downstream 42214 34687524 ~ 34687887 (+) True G189597
TU256941 lncRNA downstream 53339 34698649 ~ 34699491 (+) False G189582
XM_039781383.1 mRNA upstream 14615 34584047 ~ 34595606 (+) True LOC120546456
XM_039781801.1 mRNA upstream 38373 34559932 ~ 34571848 (+) True LOC120546680
XM_039781382.1 mRNA upstream 70134 34531388 ~ 34540087 (+) True LOC120546454
XM_039781778.1 mRNA upstream 82575 34514822 ~ 34527646 (+) True LOC120546659
XM_039781380.1 mRNA upstream 156426 34378500 ~ 34453795 (+) True LOC120546451
XM_039781767.1 mRNA downstream 135028 34780338 ~ 34795615 (+) False LOC120546653
XM_039781766.1 mRNA downstream 135031 34780341 ~ 34796403 (+) True LOC120546653
XM_039781384.1 mRNA downstream 158293 34803603 ~ 34827491 (+) True LOC120546458
XM_039781771.1 mRNA downstream 191888 34837198 ~ 34845092 (+) True LOC120546655
XM_039781755.1 mRNA downstream 211526 34856836 ~ 34895534 (+) True LOC120546649
TU256888 other upstream 2883 34592437 ~ 34607338 (+) True G189555
TU256898 other upstream 2883 34592437 ~ 34607338 (+) False G189555
TU256926 other upstream 24782 34531517 ~ 34585439 (+) False LOC120546454
XR_005637065.1 other upstream 40127 34569956 ~ 34570094 (+) True LOC120547363
XR_005637064.1 other upstream 44614 34565469 ~ 34565607 (+) True LOC120547362
TU256938 other downstream 17705 34663015 ~ 34699244 (+) True G189582
TU257129 other downstream 178732 34824042 ~ 34825170 (+) False LOC120546458
TU257179 other downstream 364190 35009500 ~ 35010825 (+) True G189738
TU257158 other downstream 369085 35014395 ~ 35017163 (+) True G189721
TU257203 other downstream 500200 35145510 ~ 35147428 (+) True LOC120546683

Expression Profile