RNA id: TU256944


Basic Information

Item Value
RNA id TU256944
length 517
lncRNA type inter_gene
GC content 0.26
exon number 2
gene id G189583
representative True

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 34613621 ~ 34617452 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ataaaaagtcatagtatagtatgtcgaaaaaagtcataaaaagtcatagtatagtatgtcgaaaactcataaagtcatagtatagtatgtcgaaaactcataaagtcatagtatagtatgttgaaaaaagtcgtaaaaagtcatagtatagtatgtcgaaaaaagtcgtaaaaagtcatagtatagtatgttgaaaaaagtcaataaaaagtcatagtatagtatgtcgaaaactcataaagtcatagtatagtatgtcgaaaaaagtcaataaaaagtcatagtatagtatgtcgaaaaaagtcataaaaagtcatagtatagtatgtcgaaaactcataaagtcatagtacagtatgttgaaaaaagtcgtaaaaagtcatagtatagtatgtcgaaaaaagtcgtaaaaagtcatagtatagtatgttgaaaaaagtcaataaaaagtcatagtatagtatgtcgaaaaaagtcataaaaagtcatagtatagtatgtcgaaaactcataaagt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005636921.1 lncRNA upstream 6279 34596185 ~ 34607342 (+) True LOC120546694
TU256892 lncRNA upstream 6283 34595660 ~ 34607338 (+) False G189555
TU256897 lncRNA upstream 6283 34595660 ~ 34607338 (+) False G189555
TU256900 lncRNA upstream 6283 34595660 ~ 34607338 (+) False G189555
TU256893 lncRNA upstream 7478 34587078 ~ 34606143 (+) False G189555
TU256945 lncRNA downstream 7316 34624768 ~ 34626755 (+) True G189584
TU256904 lncRNA downstream 10158 34627610 ~ 34629478 (+) False LOC120546652
TU256952 lncRNA downstream 35776 34653228 ~ 34662076 (+) True G189589
TU256935 lncRNA downstream 63532 34680984 ~ 34681707 (+) True G189581
TU256943 lncRNA downstream 66561 34684013 ~ 34699122 (+) False G189582
XM_039781383.1 mRNA upstream 18015 34584047 ~ 34595606 (+) True LOC120546456
XM_039781801.1 mRNA upstream 41773 34559932 ~ 34571848 (+) True LOC120546680
XM_039781382.1 mRNA upstream 73534 34531388 ~ 34540087 (+) True LOC120546454
XM_039781778.1 mRNA upstream 85975 34514822 ~ 34527646 (+) True LOC120546659
XM_039781380.1 mRNA upstream 159826 34378500 ~ 34453795 (+) True LOC120546451
XM_039781793.1 mRNA downstream 4604 34622056 ~ 34624173 (+) True LOC120546672
XM_039781765.1 mRNA downstream 10026 34627478 ~ 34630935 (+) True LOC120546652
XM_039781767.1 mRNA downstream 162886 34780338 ~ 34795615 (+) False LOC120546653
XM_039781766.1 mRNA downstream 162889 34780341 ~ 34796403 (+) True LOC120546653
XM_039781384.1 mRNA downstream 186151 34803603 ~ 34827491 (+) True LOC120546458
TU256929 other upstream 3138 34564785 ~ 34610483 (+) True G189577
TU256888 other upstream 6283 34592437 ~ 34607338 (+) True G189555
TU256898 other upstream 6283 34592437 ~ 34607338 (+) False G189555
TU256926 other upstream 28182 34531517 ~ 34585439 (+) False LOC120546454
XR_005637065.1 other upstream 43527 34569956 ~ 34570094 (+) True LOC120547363
TU256938 other downstream 45563 34663015 ~ 34699244 (+) True G189582
TU257129 other downstream 206590 34824042 ~ 34825170 (+) False LOC120546458
TU257179 other downstream 392048 35009500 ~ 35010825 (+) True G189738
TU257158 other downstream 396943 35014395 ~ 35017163 (+) True G189721
TU257203 other downstream 528058 35145510 ~ 35147428 (+) True LOC120546683

Expression Profile