RNA id: TU256970


Basic Information

Item Value
RNA id TU256970
length 255
lncRNA type inter_gene
GC content 0.38
exon number 2
gene id G189601
representative True

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 34708726 ~ 34736954 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtctgacaacattatggaaaggatccctacagagatagaccttttagttaaagagtaagatccttttagtttaacatgaaacagccccaaaatcaccatcaccaaactctaccagactccatgtaaataatcaggacttttagcatgtatagagccagcatatctccaccagactccatgtaaataatcaggacttttagcgtgtatagagccagcatatttccaccagattccatgtaaataatcaggactttt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU256941 lncRNA upstream 9235 34698649 ~ 34699491 (+) False G189582
TU256943 lncRNA upstream 9604 34684013 ~ 34699122 (+) False G189582
TU256965 lncRNA upstream 20839 34687524 ~ 34687887 (+) True G189597
TU256935 lncRNA upstream 27019 34680984 ~ 34681707 (+) True G189581
TU256952 lncRNA upstream 46650 34653228 ~ 34662076 (+) True G189589
TU257137 lncRNA downstream 93722 34830676 ~ 34836404 (+) True G189711
TU257139 lncRNA downstream 93722 34830676 ~ 34831615 (+) False G189711
TU257138 lncRNA downstream 94170 34831124 ~ 34831615 (+) False G189711
TU257156 lncRNA downstream 198563 34935517 ~ 35084911 (+) False G189720
TU257175 lncRNA downstream 213150 34950104 ~ 34950650 (+) True G189735
XM_039781765.1 mRNA upstream 77791 34627478 ~ 34630935 (+) True LOC120546652
XM_039781793.1 mRNA upstream 84553 34622056 ~ 34624173 (+) True LOC120546672
XM_039781383.1 mRNA upstream 113120 34584047 ~ 34595606 (+) True LOC120546456
XM_039781801.1 mRNA upstream 136878 34559932 ~ 34571848 (+) True LOC120546680
XM_039781382.1 mRNA upstream 168639 34531388 ~ 34540087 (+) True LOC120546454
XM_039781767.1 mRNA downstream 43384 34780338 ~ 34795615 (+) False LOC120546653
XM_039781766.1 mRNA downstream 43387 34780341 ~ 34796403 (+) True LOC120546653
XM_039781384.1 mRNA downstream 66649 34803603 ~ 34827491 (+) True LOC120546458
XM_039781771.1 mRNA downstream 100244 34837198 ~ 34845092 (+) True LOC120546655
XM_039781755.1 mRNA downstream 119882 34856836 ~ 34895534 (+) True LOC120546649
TU256938 other upstream 9482 34663015 ~ 34699244 (+) True G189582
TU256929 other upstream 98243 34564785 ~ 34610483 (+) True G189577
TU256888 other upstream 101388 34592437 ~ 34607338 (+) True G189555
TU256898 other upstream 101388 34592437 ~ 34607338 (+) False G189555
TU256926 other upstream 123287 34531517 ~ 34585439 (+) False LOC120546454
TU257129 other downstream 87088 34824042 ~ 34825170 (+) False LOC120546458
TU257179 other downstream 272546 35009500 ~ 35010825 (+) True G189738
TU257158 other downstream 277441 35014395 ~ 35017163 (+) True G189721
TU257203 other downstream 408556 35145510 ~ 35147428 (+) True LOC120546683
TU257162 other downstream 421269 35158223 ~ 35166388 (+) True G189723

Expression Profile