RNA id: TU257151


Basic Information

Item Value
RNA id TU257151
length 306
lncRNA type inter_gene
GC content 0.47
exon number 3
gene id G189720
representative False

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 34935517 ~ 35084911 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

caaagacacacacacacagacagacacacacacaacacacacacacacacacacacacacacacacagacacaaacacattcacacacagacatacacacaacacacacacacacacattcacacacacagacatacacacacacaacacacagacagacacacacacacacacacacacacacacacagacacacacacagatacacacacacacacacacacacacacacacacacacacacacacacaacacacacacacacacacacacacacacaacacacacacacacacacacacacac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU257175 lncRNA upstream 17525 34950104 ~ 34950650 (+) True G189735
TU257176 lncRNA upstream 17854 34950104 ~ 34950321 (+) False G189735
TU257137 lncRNA upstream 131771 34830676 ~ 34836404 (+) True G189711
TU257139 lncRNA upstream 136560 34830676 ~ 34831615 (+) False G189711
TU257138 lncRNA upstream 136560 34831124 ~ 34831615 (+) False G189711
TU257166 lncRNA downstream 12774 35097685 ~ 35126266 (+) True G189726
TU257194 lncRNA downstream 19089 35104000 ~ 35107669 (+) True G189750
TU257196 lncRNA downstream 41563 35126474 ~ 35181095 (+) True G189752
TU257197 lncRNA downstream 43963 35128874 ~ 35130294 (+) True G189753
TU257198 lncRNA downstream 43963 35128874 ~ 35129538 (+) False G189753
XM_039781773.1 mRNA upstream 26844 34928418 ~ 34941331 (+) False allc
XM_039781772.1 mRNA upstream 26844 34928419 ~ 34941331 (+) True allc
XM_039781715.1 mRNA upstream 41012 34905991 ~ 34927163 (+) True LOC120546635
XM_039781757.1 mRNA upstream 72641 34882295 ~ 34895534 (+) False LOC120546649
XM_039781791.1 mRNA downstream 103005 35187916 ~ 35193265 (+) True gje1
XM_039781788.1 mRNA downstream 119295 35204206 ~ 35345930 (+) True vta1
XM_039781789.1 mRNA downstream 119295 35204206 ~ 35345930 (+) False vta1
XM_039781774.1 mRNA downstream 304798 35389709 ~ 35403269 (+) True ccr6a
XM_039781389.1 mRNA downstream 441977 35526888 ~ 35532983 (+) True LOC120546462
TU257129 other upstream 143005 34824042 ~ 34825170 (+) False LOC120546458
TU256938 other upstream 268931 34663015 ~ 34699244 (+) True G189582
TU256888 other upstream 360837 34592437 ~ 34607338 (+) True G189555
TU256898 other upstream 360837 34592437 ~ 34607338 (+) False G189555
XR_005637065.1 other upstream 398081 34569956 ~ 34570094 (+) True LOC120547363
TU257203 other downstream 60599 35145510 ~ 35147428 (+) True LOC120546683
TU257162 other downstream 73312 35158223 ~ 35166388 (+) True G189723
TU257244 other downstream 164830 35249741 ~ 35250635 (+) False G189769
TU257254 other downstream 166869 35251780 ~ 35307435 (+) True G189770
TU257245 other downstream 214050 35298961 ~ 35299978 (+) True G189769

Expression Profile