RNA id: TU257166



Basic Information


Item Value
RNA id TU257166
length 724
lncRNA type inter_gene
GC content 0.49
exon number 3
gene id G189726
representative True

Chromosome Information


Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 35097685 ~ 35126266 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


agacacacacacacacacacacacacacacacacacacacacacacacaaagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactcagagacacacacacacagacacacacacacacacacacacacacacacacagacacacagacacacacacacacacacacacacagacacacacacacacacagacagacacagacacacatacagacacacacacacacacacacacacacacacacagacacacacacacacacacacacacacacagacacacatagacacacacacacacacacacacacacacacagacacacacagacacacacaaacacacacacagacacacacacacacacacacacacacagacacacacacacacacacacacacacacagacacacacacacagacacacacacacacacacacacagacacacacacacacacacacacatagacacacacacacagacacacatagacacacacacacagacacacacagacacacacacacagacacacacacacagacacacacagacacacacacacacagacacacacacacacacacacacacacacacacacacacacagacacacagtcacagacacacacacacacacacacacacacacacacacacagacacacagacagacacacacacacac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU257156 lncRNA upstream 12774 34935517 ~ 35084911 (+) False G189720
TU257151 lncRNA upstream 12774 34968175 ~ 35084911 (+) False G189720
TU257152 lncRNA upstream 12774 34990030 ~ 35084911 (+) False G189720
TU257170 lncRNA upstream 15315 35020864 ~ 35082370 (+) True G189730
TU257169 lncRNA upstream 16358 35015966 ~ 35081327 (+) True G189729
TU257196 lncRNA downstream 208 35126474 ~ 35181095 (+) True G189752
TU257197 lncRNA downstream 2608 35128874 ~ 35130294 (+) True G189753
TU257198 lncRNA downstream 2608 35128874 ~ 35129538 (+) False G189753
TU257201 lncRNA downstream 9452 35135718 ~ 35137669 (+) True G189755
XR_005636906.1 lncRNA downstream 19223 35145489 ~ 35147265 (+) False LOC120546683
XM_039781773.1 mRNA upstream 156354 34928418 ~ 34941331 (+) False allc
XM_039781772.1 mRNA upstream 156354 34928419 ~ 34941331 (+) True allc
XM_039781715.1 mRNA upstream 170522 34905991 ~ 34927163 (+) True LOC120546635
XM_039781757.1 mRNA upstream 202151 34882295 ~ 34895534 (+) False LOC120546649
XM_039781791.1 mRNA downstream 61650 35187916 ~ 35193265 (+) True gje1
XM_039781788.1 mRNA downstream 77940 35204206 ~ 35345930 (+) True vta1
XM_039781789.1 mRNA downstream 77940 35204206 ~ 35345930 (+) False vta1
XM_039781774.1 mRNA downstream 263443 35389709 ~ 35403269 (+) True ccr6a
XM_039781389.1 mRNA downstream 400622 35526888 ~ 35532983 (+) True LOC120546462
TU257158 other upstream 80522 35014395 ~ 35017163 (+) True G189721
TU257179 other upstream 86860 35009500 ~ 35010825 (+) True G189738
TU257129 other upstream 272515 34824042 ~ 34825170 (+) False LOC120546458
TU256938 other upstream 398441 34663015 ~ 34699244 (+) True G189582
TU256898 other upstream 490347 34592437 ~ 34607338 (+) False G189555
TU257203 other downstream 19244 35145510 ~ 35147428 (+) True LOC120546683
TU257162 other downstream 31957 35158223 ~ 35166388 (+) True G189723
TU257244 other downstream 123475 35249741 ~ 35250635 (+) False G189769
TU257254 other downstream 125514 35251780 ~ 35307435 (+) True G189770
TU257245 other downstream 172695 35298961 ~ 35299978 (+) True G189769

Expression Profile