RNA id: TU257176



Basic Information


Item Value
RNA id TU257176
length 173
lncRNA type inter_gene
GC content 0.39
exon number 2
gene id G189735
representative False

Chromosome Information


Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 34950104 ~ 34950650 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gttaaggtgagggtaagggttaaggttaggtatttagttgtgatggttaaggttagggtaagggttaaggttaggcatttagttgtgatggttaaggttagggtaagggttaaggttaggtatttagttgtgatggttaaggttagggtaagggttaaggttaggcatttagt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU257137 lncRNA upstream 113700 34830676 ~ 34836404 (+) True G189711
TU257139 lncRNA upstream 118489 34830676 ~ 34831615 (+) False G189711
TU257138 lncRNA upstream 118489 34831124 ~ 34831615 (+) False G189711
TU256970 lncRNA upstream 213150 34708726 ~ 34736954 (+) True G189601
TU257153 lncRNA downstream 8931 34959252 ~ 35014287 (+) False G189720
TU257172 lncRNA downstream 16010 34966331 ~ 34984803 (+) True G189732
TU257154 lncRNA downstream 16391 34966712 ~ 35065972 (+) False G189720
TU257151 lncRNA downstream 17854 34968175 ~ 35084911 (+) False G189720
TU257155 lncRNA downstream 34129 34984450 ~ 35014287 (+) True G189720
XM_039781773.1 mRNA upstream 8773 34928418 ~ 34941331 (+) False allc
XM_039781772.1 mRNA upstream 8773 34928419 ~ 34941331 (+) True allc
XM_039781715.1 mRNA upstream 22941 34905991 ~ 34927163 (+) True LOC120546635
XM_039781757.1 mRNA upstream 54570 34882295 ~ 34895534 (+) False LOC120546649
XM_039781791.1 mRNA downstream 237595 35187916 ~ 35193265 (+) True gje1
XM_039781788.1 mRNA downstream 253885 35204206 ~ 35345930 (+) True vta1
XM_039781789.1 mRNA downstream 253885 35204206 ~ 35345930 (+) False vta1
XM_039781774.1 mRNA downstream 439388 35389709 ~ 35403269 (+) True ccr6a
XM_039781389.1 mRNA downstream 576567 35526888 ~ 35532983 (+) True LOC120546462
TU257129 other upstream 124934 34824042 ~ 34825170 (+) False LOC120546458
TU256938 other upstream 250860 34663015 ~ 34699244 (+) True G189582
TU256888 other upstream 342766 34592437 ~ 34607338 (+) True G189555
TU256898 other upstream 342766 34592437 ~ 34607338 (+) False G189555
XR_005637065.1 other upstream 380010 34569956 ~ 34570094 (+) True LOC120547363
TU257179 other downstream 59179 35009500 ~ 35010825 (+) True G189738
TU257158 other downstream 64074 35014395 ~ 35017163 (+) True G189721
TU257203 other downstream 195189 35145510 ~ 35147428 (+) True LOC120546683
TU257162 other downstream 207902 35158223 ~ 35166388 (+) True G189723
TU257244 other downstream 299420 35249741 ~ 35250635 (+) False G189769

Expression Profile