RNA id: TU257196


Basic Information

Item Value
RNA id TU257196
length 217
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G189752
representative True

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 35126474 ~ 35181095 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

acacacacacacacacacacacacacacagacacacagacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacacacacagacacacacaccaacacacacacacacacacacacagacacacagacagacacacacacagacagacagacagacagacagacagacagacagacagacagacagacagc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU257166 lncRNA upstream 208 35097685 ~ 35126266 (+) True G189726
TU257194 lncRNA upstream 18805 35104000 ~ 35107669 (+) True G189750
TU257151 lncRNA upstream 41563 34968175 ~ 35084911 (+) False G189720
TU257152 lncRNA upstream 41563 34990030 ~ 35084911 (+) False G189720
TU257170 lncRNA upstream 44104 35020864 ~ 35082370 (+) True G189730
TU257252 lncRNA downstream 60160 35241255 ~ 35315037 (+) False G189770
TU257257 lncRNA downstream 63429 35244524 ~ 35245381 (+) True G189771
TU257256 lncRNA downstream 75861 35256956 ~ 35307435 (+) False G189770
TU257221 lncRNA downstream 77483 35258578 ~ 35446421 (+) False G189767
TU257224 lncRNA downstream 77483 35258578 ~ 35348195 (+) False G189767
XM_039781773.1 mRNA upstream 185143 34928418 ~ 34941331 (+) False allc
XM_039781772.1 mRNA upstream 185143 34928419 ~ 34941331 (+) True allc
XM_039781715.1 mRNA upstream 199311 34905991 ~ 34927163 (+) True LOC120546635
XM_039781757.1 mRNA upstream 230940 34882295 ~ 34895534 (+) False LOC120546649
XM_039781791.1 mRNA downstream 6821 35187916 ~ 35193265 (+) True gje1
XM_039781788.1 mRNA downstream 23111 35204206 ~ 35345930 (+) True vta1
XM_039781789.1 mRNA downstream 23111 35204206 ~ 35345930 (+) False vta1
XM_039781774.1 mRNA downstream 208614 35389709 ~ 35403269 (+) True ccr6a
XM_039781389.1 mRNA downstream 345793 35526888 ~ 35532983 (+) True LOC120546462
TU257158 other upstream 109311 35014395 ~ 35017163 (+) True G189721
TU257179 other upstream 115649 35009500 ~ 35010825 (+) True G189738
TU257129 other upstream 301304 34824042 ~ 34825170 (+) False LOC120546458
TU256938 other upstream 427230 34663015 ~ 34699244 (+) True G189582
TU256898 other upstream 519136 34592437 ~ 34607338 (+) False G189555
TU257244 other downstream 68646 35249741 ~ 35250635 (+) False G189769
TU257254 other downstream 70685 35251780 ~ 35307435 (+) True G189770
TU257245 other downstream 117866 35298961 ~ 35299978 (+) True G189769
TU257294 other downstream 345753 35526848 ~ 35530343 (+) False LOC120546462
TU257342 other downstream 731425 35912520 ~ 35916478 (+) False zbtb25

Expression Profile