RNA id: TU257209


Basic Information

Item Value
RNA id TU257209
length 383
lncRNA type inter_gene
GC content 0.44
exon number 2
gene id G189763
representative True

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 35174810 ~ 35175869 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

accgacacAAAAATCTCCCTTTAGCGTCTGATGGGacacaccgggcagagcagcagtagAGAgaagtatgtagagagacagcagtagagagtagtatgtagagagacaacagtagagagtagtatgtagagagacagcagtagagagtagtatgtagagagacagcagtagagagtagtatgtagagagacagcagtagagagtagtatgaagagagacaacagtagagagtagtatgtagagagacagcagtagagagtagtatgtagagagacagcagtagagagtagtatgtagagagacaacagtagagagtagtgtgtagagagacaacagtagagagtagtgtgtagagagacagcagtagagagtagtatgtagag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU257167 lncRNA upstream 11295 35162057 ~ 35163515 (+) True G189727
XR_005636906.1 lncRNA upstream 27545 35145489 ~ 35147265 (+) False LOC120546683
TU257201 lncRNA upstream 37141 35135718 ~ 35137669 (+) True G189755
TU257197 lncRNA upstream 44516 35128874 ~ 35130294 (+) True G189753
TU257198 lncRNA upstream 45272 35128874 ~ 35129538 (+) False G189753
TU257171 lncRNA downstream 1756 35177625 ~ 35178368 (+) True G189731
TU257252 lncRNA downstream 65386 35241255 ~ 35315037 (+) False G189770
TU257257 lncRNA downstream 68655 35244524 ~ 35245381 (+) True G189771
TU257256 lncRNA downstream 81087 35256956 ~ 35307435 (+) False G189770
TU257221 lncRNA downstream 82709 35258578 ~ 35446421 (+) False G189767
XM_039781773.1 mRNA upstream 233479 34928418 ~ 34941331 (+) False allc
XM_039781772.1 mRNA upstream 233479 34928419 ~ 34941331 (+) True allc
XM_039781715.1 mRNA upstream 247647 34905991 ~ 34927163 (+) True LOC120546635
XM_039781757.1 mRNA upstream 279276 34882295 ~ 34895534 (+) False LOC120546649
XM_039781791.1 mRNA downstream 12047 35187916 ~ 35193265 (+) True gje1
XM_039781788.1 mRNA downstream 28337 35204206 ~ 35345930 (+) True vta1
XM_039781789.1 mRNA downstream 28337 35204206 ~ 35345930 (+) False vta1
XM_039781774.1 mRNA downstream 213840 35389709 ~ 35403269 (+) True ccr6a
XM_039781389.1 mRNA downstream 351019 35526888 ~ 35532983 (+) True LOC120546462
TU257162 other upstream 8422 35158223 ~ 35166388 (+) True G189723
TU257203 other upstream 27382 35145510 ~ 35147428 (+) True LOC120546683
TU257158 other upstream 157647 35014395 ~ 35017163 (+) True G189721
TU257179 other upstream 163985 35009500 ~ 35010825 (+) True G189738
TU257129 other upstream 349640 34824042 ~ 34825170 (+) False LOC120546458
TU257244 other downstream 73872 35249741 ~ 35250635 (+) False G189769
TU257254 other downstream 75911 35251780 ~ 35307435 (+) True G189770
TU257245 other downstream 123092 35298961 ~ 35299978 (+) True G189769
TU257294 other downstream 350979 35526848 ~ 35530343 (+) False LOC120546462
TU257342 other downstream 736651 35912520 ~ 35916478 (+) False zbtb25

Expression Profile