RNA id: TU257348


Basic Information

Item Value
RNA id TU257348
length 256
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G189830
representative True

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 35816753 ~ 35823860 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

cgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtctttgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtctgtgtgtgtctgtgtgtgtgtgtctgtgtgtctgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU257310 lncRNA upstream 28774 35599114 ~ 35787979 (+) True G189801
TU257319 lncRNA upstream 146057 35665194 ~ 35670696 (+) True G189809
TU257295 lncRNA upstream 246951 35530461 ~ 35569802 (+) True G189793
TU257344 lncRNA downstream 42648 35866508 ~ 35914703 (+) True G189826
TU257364 lncRNA downstream 55624 35879484 ~ 35880060 (+) True G189845
TU257335 lncRNA downstream 67182 35891042 ~ 35910681 (+) True G189821
TU257338 lncRNA downstream 67182 35891042 ~ 35985685 (+) False G189821
TU257384 lncRNA downstream 131197 35955057 ~ 35981248 (+) True G189857
XM_039781389.1 mRNA upstream 283770 35526888 ~ 35532983 (+) True LOC120546462
XM_039781774.1 mRNA upstream 413484 35389709 ~ 35403269 (+) True ccr6a
XM_039781788.1 mRNA upstream 470823 35204206 ~ 35345930 (+) True vta1
XM_039781789.1 mRNA upstream 470823 35204206 ~ 35345930 (+) False vta1
XM_039781791.1 mRNA upstream 623488 35187916 ~ 35193265 (+) True gje1
XM_039781750.1 mRNA downstream 19902 35843762 ~ 35856031 (+) True LOC120546647
XM_039781751.1 mRNA downstream 19902 35843762 ~ 35856031 (+) False LOC120546647
XM_039781390.1 mRNA downstream 36932 35860792 ~ 35877941 (+) True LOC120546463
XM_039781768.1 mRNA downstream 88636 35912496 ~ 35917525 (+) False zbtb25
XM_039781769.1 mRNA downstream 88676 35912536 ~ 35917525 (+) True zbtb25
TU257294 other upstream 286410 35526848 ~ 35530343 (+) False LOC120546462
TU257254 other upstream 509318 35251780 ~ 35307435 (+) True G189770
TU257245 other upstream 516775 35298961 ~ 35299978 (+) True G189769
TU257244 other upstream 566118 35249741 ~ 35250635 (+) False G189769
TU257162 other upstream 650365 35158223 ~ 35166388 (+) True G189723
TU257342 other downstream 88660 35912520 ~ 35916478 (+) False zbtb25
TU257395 other downstream 157958 35981818 ~ 36019599 (+) True G189858
TU257398 other downstream 157958 35981818 ~ 36019599 (+) False G189858
TU257460 other downstream 390021 36213881 ~ 36214599 (+) True G189895
TU257465 other downstream 550440 36374300 ~ 36375834 (+) True G189897

Expression Profile