RNA id: TU257390



Basic Information


Item Value
RNA id TU257390
length 745
lncRNA type inter_gene
GC content 0.45
exon number 6
gene id G189857
representative False

Chromosome Information


Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 35955057 ~ 36018166 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TTCAGAGTCCACACTGTAaactggaaactctcagCCTGAGTCTCTGTgatctgtcagagagaagctgtgaagatctgtcctcagttctcagctctgagtcctctagtctgagagaccTGGACCTGAGTTACAACAAGAACCTGAAGGATTCAGCGCTGAAGAAGCTCTCTGCTGGACTTCAGAGTCCCCACTGTAAAATAACCATATGACATAAATGTTCTTCTTAGAAATGATGAAATGATCTCCTCAGGGCTGAACAAACAAGACTAGACCAAAACAGAGAAGAGaccagaggcctggactacgaagcaggatttggtgttaacgaggtaacttcaggttcaacccagggatACCCTGTATCACAacggtggatcagttgttaccgggttaaatcaccgtggtaacttatgctaacctggtcaggagcaTTATggtatgttggagattagagaccAACCGGTGTAagagcaccgcctactgaccaatcaatactcagtgttaaagcaccgcctactgaccaatcaatactcagtgttaaacaccacctactgaccaatcaatactcagtgttaaacaccacctactgaccaatcaatactcagtgttaaacaccacctactgaccaatcaatactcagtgttaaacaccacctactgaccaatcaatactcagtgttaaagcaccgcctactgaccaatcaatactcagtgttaaagcaccgcctactgaccaatcaatacta

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU257388 lncRNA upstream 7695 35955057 ~ 35963080 (+) False G189857
TU257391 lncRNA upstream 7695 35955934 ~ 35963080 (+) False G189857
TU257344 lncRNA upstream 56072 35866508 ~ 35914703 (+) True G189826
TU257335 lncRNA upstream 60094 35891042 ~ 35910681 (+) True G189821
TU257364 lncRNA upstream 90715 35879484 ~ 35880060 (+) True G189845
TU257413 lncRNA downstream 38367 36056533 ~ 36087702 (+) True G189869
XR_005636908.1 lncRNA downstream 103939 36122105 ~ 36133095 (+) False LOC120546684
XR_005636916.1 lncRNA downstream 106608 36124774 ~ 36127996 (+) True LOC120546689
XR_005636907.1 lncRNA downstream 113532 36131698 ~ 36133095 (+) True LOC120546684
XR_005636918.1 lncRNA downstream 142352 36160518 ~ 36165136 (+) True LOC120546691
XM_039781768.1 mRNA upstream 53250 35912496 ~ 35917525 (+) False zbtb25
XM_039781769.1 mRNA upstream 53250 35912536 ~ 35917525 (+) True zbtb25
XM_039781390.1 mRNA upstream 92834 35860792 ~ 35877941 (+) True LOC120546463
XM_039781750.1 mRNA upstream 114744 35843762 ~ 35856031 (+) True LOC120546647
XM_039781738.1 mRNA downstream 214784 36232950 ~ 36257742 (+) True LOC120546641
XM_039781731.1 mRNA downstream 251122 36269288 ~ 36313267 (+) True LOC120546639
XM_039781730.1 mRNA downstream 251122 36269288 ~ 36313267 (+) False LOC120546639
XM_039781735.1 mRNA downstream 251122 36269288 ~ 36313267 (+) False LOC120546639
XM_039781733.1 mRNA downstream 251122 36269288 ~ 36313267 (+) False LOC120546639
TU257342 other upstream 54297 35912520 ~ 35916478 (+) False zbtb25
TU257294 other upstream 440432 35526848 ~ 35530343 (+) False LOC120546462
TU257254 other upstream 663340 35251780 ~ 35307435 (+) True G189770
TU257245 other upstream 670797 35298961 ~ 35299978 (+) True G189769
TU257244 other upstream 720140 35249741 ~ 35250635 (+) False G189769
TU257460 other downstream 195715 36213881 ~ 36214599 (+) True G189895
TU257465 other downstream 356134 36374300 ~ 36375834 (+) True G189897
TU257496 other downstream 364742 36382908 ~ 36398240 (+) False LOC120546466
TU257528 other downstream 518513 36536679 ~ 36541312 (+) True G189944
TU257569 other downstream 634037 36652203 ~ 36653482 (+) False xrcc3

Expression Profile