RNA id: TU257391


Basic Information

Item Value
RNA id TU257391
length 332
lncRNA type inter_gene
GC content 0.45
exon number 2
gene id G189857
representative False

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 35955057 ~ 36018166 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

aaaagattacaTAACTAAAAACCTGGCTCTCagacacatttaacattaagACCAATGTTGTTAATTGTGTTCATTTATTTACAGGCTGAGGGTACTGTggtctgtcagagagaagctgtgaagatctgtcctcagttctcagctctgagtcctctagtctgagagaccTGGACCTGAGTTGGAACAAGAACctgaaggattcaggagtgaagaatctctctgctggacttcagagtccacactgtaaactggaaactctcagCCTGAGGTACTGTggtctgtcagagagaagctgtgaagatctgtcctcagttctcagctctgaGTCCTCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU257344 lncRNA upstream 41231 35866508 ~ 35914703 (+) True G189826
TU257335 lncRNA upstream 45253 35891042 ~ 35910681 (+) True G189821
TU257364 lncRNA upstream 75874 35879484 ~ 35880060 (+) True G189845
TU257348 lncRNA upstream 132074 35816753 ~ 35823860 (+) True G189830
TU257345 lncRNA upstream 133722 35816159 ~ 35822212 (+) True G189827
TU257385 lncRNA downstream 7695 35970775 ~ 36015889 (+) False G189857
TU257390 lncRNA downstream 7695 35970775 ~ 36018166 (+) False G189857
TU257404 lncRNA downstream 50934 36014014 ~ 36017327 (+) True G189860
TU257413 lncRNA downstream 93453 36056533 ~ 36087702 (+) True G189869
XR_005636908.1 lncRNA downstream 159025 36122105 ~ 36133095 (+) False LOC120546684
XM_039781768.1 mRNA upstream 38409 35912496 ~ 35917525 (+) False zbtb25
XM_039781769.1 mRNA upstream 38409 35912536 ~ 35917525 (+) True zbtb25
XM_039781390.1 mRNA upstream 77993 35860792 ~ 35877941 (+) True LOC120546463
XM_039781750.1 mRNA upstream 99903 35843762 ~ 35856031 (+) True LOC120546647
XM_039781738.1 mRNA downstream 269870 36232950 ~ 36257742 (+) True LOC120546641
XM_039781731.1 mRNA downstream 306208 36269288 ~ 36313267 (+) True LOC120546639
XM_039781730.1 mRNA downstream 306208 36269288 ~ 36313267 (+) False LOC120546639
XM_039781735.1 mRNA downstream 306208 36269288 ~ 36313267 (+) False LOC120546639
XM_039781733.1 mRNA downstream 306208 36269288 ~ 36313267 (+) False LOC120546639
TU257342 other upstream 39456 35912520 ~ 35916478 (+) False zbtb25
TU257294 other upstream 425591 35526848 ~ 35530343 (+) False LOC120546462
TU257254 other upstream 648499 35251780 ~ 35307435 (+) True G189770
TU257245 other upstream 655956 35298961 ~ 35299978 (+) True G189769
TU257244 other upstream 705299 35249741 ~ 35250635 (+) False G189769
TU257395 other downstream 18738 35981818 ~ 36019599 (+) True G189858
TU257398 other downstream 18738 35981818 ~ 36019599 (+) False G189858
TU257460 other downstream 250801 36213881 ~ 36214599 (+) True G189895
TU257465 other downstream 411220 36374300 ~ 36375834 (+) True G189897
TU257496 other downstream 419828 36382908 ~ 36398240 (+) False LOC120546466

Expression Profile