RNA id: TU257429


Basic Information

Item Value
RNA id TU257429
length 452
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G189879
representative True

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 36178916 ~ 36179450 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtttgtgtgtgtgtgtctgtgtgtgtgtgtgtttgtgtgtctgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgtgtctgtgtgtgtgtgtctgtgtttgtgtctgtgtgtgtgtgtgtgtctgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtcgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtttctgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctgtctgtgtgtgtgtgtgtctctgtgtgtgtctctgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtatgtc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005636918.1 lncRNA upstream 13780 36160518 ~ 36165136 (+) True LOC120546691
XR_005636908.1 lncRNA upstream 45821 36122105 ~ 36133095 (+) False LOC120546684
XR_005636907.1 lncRNA upstream 45821 36131698 ~ 36133095 (+) True LOC120546684
XR_005636916.1 lncRNA upstream 50920 36124774 ~ 36127996 (+) True LOC120546689
TU257413 lncRNA upstream 91214 36056533 ~ 36087702 (+) True G189869
TU257436 lncRNA downstream 8446 36187896 ~ 36191848 (+) False G189881
TU257437 lncRNA downstream 8446 36187896 ~ 36191848 (+) False G189881
TU257434 lncRNA downstream 11776 36191226 ~ 36191848 (+) False G189881
TU257435 lncRNA downstream 11776 36191226 ~ 36191848 (+) False G189881
TU257438 lncRNA downstream 11776 36191226 ~ 36191848 (+) False G189881
XM_039781768.1 mRNA upstream 261391 35912496 ~ 35917525 (+) False zbtb25
XM_039781769.1 mRNA upstream 261391 35912536 ~ 35917525 (+) True zbtb25
XM_039781390.1 mRNA upstream 300975 35860792 ~ 35877941 (+) True LOC120546463
XM_039781750.1 mRNA upstream 322885 35843762 ~ 35856031 (+) True LOC120546647
XM_039781738.1 mRNA downstream 53500 36232950 ~ 36257742 (+) True LOC120546641
XM_039781731.1 mRNA downstream 89838 36269288 ~ 36313267 (+) True LOC120546639
XM_039781730.1 mRNA downstream 89838 36269288 ~ 36313267 (+) False LOC120546639
XM_039781735.1 mRNA downstream 89838 36269288 ~ 36313267 (+) False LOC120546639
XM_039781733.1 mRNA downstream 89838 36269288 ~ 36313267 (+) False LOC120546639
TU257395 other upstream 159317 35981818 ~ 36019599 (+) True G189858
TU257398 other upstream 159317 35981818 ~ 36019599 (+) False G189858
TU257342 other upstream 262438 35912520 ~ 35916478 (+) False zbtb25
TU257294 other upstream 648573 35526848 ~ 35530343 (+) False LOC120546462
TU257245 other upstream 878938 35298961 ~ 35299978 (+) True G189769
TU257460 other downstream 34431 36213881 ~ 36214599 (+) True G189895
TU257465 other downstream 194850 36374300 ~ 36375834 (+) True G189897
TU257496 other downstream 203458 36382908 ~ 36398240 (+) False LOC120546466
TU257528 other downstream 357229 36536679 ~ 36541312 (+) True G189944
TU257569 other downstream 472753 36652203 ~ 36653482 (+) False xrcc3

Expression Profile