RNA id: TU257458


Basic Information

Item Value
RNA id TU257458
length 409
lncRNA type sense_over
GC content 0.50
exon number 6
gene id G189893
representative True

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 36544183 ~ 36662621 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

cacacacactcagacacacacacagacacacacacacacagacacacacacacacacagagacacacacacagacacacacacacaaagagagacacacacacagacacacacacacacagacacacacacagagacacacacacagacacacacacacacagagacacacacacagagacacacacacacacagagacacacacacacacagacacacacacagagacacacacacacacagacacacacacacagacacacacacacacacacacacacacacacacagacacacacacacacacacacacagagcacacacacacagacacacacagacacacacacagacacacacagacacacacacagacacagacacacacacacagacacacacacacacg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU257454 lncRNA upstream 9886 36529546 ~ 36534297 (+) True G189889
TU257457 lncRNA upstream 14359 36455164 ~ 36529824 (+) True G189892
TU257525 lncRNA upstream 22537 36520357 ~ 36521646 (+) True G189942
TU257504 lncRNA upstream 72800 36470323 ~ 36471383 (+) True G189927
TU257507 lncRNA upstream 98548 36444329 ~ 36445635 (+) False LOC120546466
TU257582 lncRNA downstream 330 36662951 ~ 36663310 (+) True G189973
TU257608 lncRNA downstream 37864 36700485 ~ 36751626 (+) False G189981
TU257601 lncRNA downstream 44260 36706881 ~ 36775559 (+) True G189978
TU257616 lncRNA downstream 51674 36714295 ~ 36724052 (+) True G189985
TU257618 lncRNA downstream 52762 36715383 ~ 36715998 (+) True G189986
XM_039781393.1 mRNA upstream 98902 36382917 ~ 36445281 (+) True LOC120546466
XM_039781786.1 mRNA upstream 211130 36330145 ~ 36333053 (+) True LOC120546666
XM_039781735.1 mRNA upstream 230916 36269288 ~ 36313267 (+) False LOC120546639
XM_039781762.1 mRNA downstream 3460 36666081 ~ 36679578 (+) False LOC120546651
XM_039781763.1 mRNA downstream 3472 36666093 ~ 36681833 (+) True LOC120546651
XM_039781760.1 mRNA downstream 3472 36666093 ~ 36679578 (+) False LOC120546651
XM_039781764.1 mRNA downstream 3472 36666093 ~ 36678038 (+) False LOC120546651
XM_039781745.1 mRNA downstream 62729 36725350 ~ 36746137 (+) True LOC120546644
TU257528 other upstream 2871 36536679 ~ 36541312 (+) True G189944
TU257496 other upstream 145943 36382908 ~ 36398240 (+) False LOC120546466
TU257465 other upstream 168349 36374300 ~ 36375834 (+) True G189897
TU257460 other upstream 329584 36213881 ~ 36214599 (+) True G189895
TU257395 other upstream 524584 35981818 ~ 36019599 (+) True G189858
TU257530 other downstream 259811 36922432 ~ 36949307 (+) False LOC120546470

Expression Profile