RNA id: TU257569


Basic Information

Item Value
RNA id TU257569
length 443
RNA type TUCP
GC content 0.60
exon number 3
gene id xrcc3
representative False

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 36652178 ~ 36664382 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GGGTATTTGGTGTGTGAAGTGGTCCGGGcagaaacaaacagacagacgtATTAATTAGTGAATTAAAGGCAGTTTAGTGAGTTTTTGTCGCAGTGTGAGAGTGAAGCAGCGGCGGGGACAGCATGTCCGCAGCGGGGAGATGGACTGGGACCAACTGGAGCTCAACCCCAGGATCATAGCATCCGTTAGGAGAGtgaAACTGAAGTCCGTGCGCGAGGCATTGTGTGTTTCCGGTCCAGACCTGCAGAGACTCACCGGTCTGTCCCGCTCAGACGTCCAGCAGCTAAAGACCGCCGCGGCCGTCGCGTGCAGAcgccacccccccaccccagctGTCCTGCTGCAGGGTGGATATAGTGGTCTCAGACTGAGCGTGGGCTGTCCTGTCCTGGACCAGCTGCTGCGGGGGGGTCTGCCTGCGGGGGGGGTCACCGAGCTGTCCG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU257573 lncRNA upstream 24560 36603968 ~ 36627643 (+) True G189964
TU257540 lncRNA upstream 70182 36581450 ~ 36582021 (+) True G189951
TU257541 lncRNA upstream 70182 36581450 ~ 36582021 (+) False G189951
TU257543 lncRNA upstream 70182 36581450 ~ 36582021 (+) False G189951
TU257456 lncRNA upstream 105612 36509295 ~ 36546591 (+) True G189891
TU257572 lncRNA downstream 658 36654140 ~ 36654916 (+) True G189963
TU257570 lncRNA downstream 8458 36661940 ~ 36664382 (+) True xrcc3
TU257582 lncRNA downstream 9469 36662951 ~ 36663310 (+) True G189973
TU257608 lncRNA downstream 47003 36700485 ~ 36751626 (+) False G189981
TU257601 lncRNA downstream 53399 36706881 ~ 36775559 (+) True G189978
XM_039781393.1 mRNA upstream 206922 36382917 ~ 36445281 (+) True LOC120546466
XM_039781786.1 mRNA upstream 319150 36330145 ~ 36333053 (+) True LOC120546666
XM_039781735.1 mRNA upstream 338936 36269288 ~ 36313267 (+) False LOC120546639
XM_039781762.1 mRNA downstream 12599 36666081 ~ 36679578 (+) False LOC120546651
XM_039781763.1 mRNA downstream 12611 36666093 ~ 36681833 (+) True LOC120546651
XM_039781760.1 mRNA downstream 12611 36666093 ~ 36679578 (+) False LOC120546651
XM_039781764.1 mRNA downstream 12611 36666093 ~ 36678038 (+) False LOC120546651
XM_039781745.1 mRNA downstream 71868 36725350 ~ 36746137 (+) True LOC120546644
TU257528 other upstream 110891 36536679 ~ 36541312 (+) True G189944
TU257496 other upstream 253963 36382908 ~ 36398240 (+) False LOC120546466
TU257465 other upstream 276369 36374300 ~ 36375834 (+) True G189897
TU257460 other upstream 437604 36213881 ~ 36214599 (+) True G189895
TU257395 other upstream 632604 35981818 ~ 36019599 (+) True G189858
TU257530 other downstream 268950 36922432 ~ 36949307 (+) False LOC120546470

Expression Profile