RNA id: TU257573


Basic Information

Item Value
RNA id TU257573
length 323
lncRNA type inter_gene
GC content 0.50
exon number 3
gene id G189964
representative True

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 36603968 ~ 36627643 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ctgtgtgtgtgtgtgtctgtgtgtgtgtttctgtgtgtgtctctgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctctgtgtgtgtctctgtgtgtgtgtgtgtgtctctgtgtgtgtctctgtgtgtgtctctgtgtgtgtctctgtgtgtgtctctgtgtgtgtctctgtgtgtgtctctgtgtgtgtgtatctctgtgtatgtgtgtgtgtgtgtgtgtgtttatgagcagatgaagatgatgatgaagaagatTACTCACCCCCCTGCAGCGTCTGGGCCCGGGACTCTTTCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU257540 lncRNA upstream 21947 36581450 ~ 36582021 (+) True G189951
TU257541 lncRNA upstream 21947 36581450 ~ 36582021 (+) False G189951
TU257543 lncRNA upstream 21947 36581450 ~ 36582021 (+) False G189951
TU257456 lncRNA upstream 57377 36509295 ~ 36546591 (+) True G189891
TU257454 lncRNA upstream 69671 36529546 ~ 36534297 (+) True G189889
TU257572 lncRNA downstream 26497 36654140 ~ 36654916 (+) True G189963
TU257570 lncRNA downstream 34297 36661940 ~ 36664382 (+) True xrcc3
TU257582 lncRNA downstream 35308 36662951 ~ 36663310 (+) True G189973
TU257608 lncRNA downstream 72842 36700485 ~ 36751626 (+) False G189981
TU257601 lncRNA downstream 79238 36706881 ~ 36775559 (+) True G189978
XM_039781393.1 mRNA upstream 158687 36382917 ~ 36445281 (+) True LOC120546466
XM_039781786.1 mRNA upstream 270915 36330145 ~ 36333053 (+) True LOC120546666
XM_039781735.1 mRNA upstream 290701 36269288 ~ 36313267 (+) False LOC120546639
XM_039781394.1 mRNA downstream 24535 36652178 ~ 36663789 (+) False xrcc3
XM_039781762.1 mRNA downstream 38438 36666081 ~ 36679578 (+) False LOC120546651
XM_039781763.1 mRNA downstream 38450 36666093 ~ 36681833 (+) True LOC120546651
XM_039781760.1 mRNA downstream 38450 36666093 ~ 36679578 (+) False LOC120546651
XM_039781764.1 mRNA downstream 38450 36666093 ~ 36678038 (+) False LOC120546651
TU257528 other upstream 62656 36536679 ~ 36541312 (+) True G189944
TU257496 other upstream 205728 36382908 ~ 36398240 (+) False LOC120546466
TU257465 other upstream 228134 36374300 ~ 36375834 (+) True G189897
TU257460 other upstream 389369 36213881 ~ 36214599 (+) True G189895
TU257398 other upstream 584369 35981818 ~ 36019599 (+) False G189858
TU257569 other downstream 24560 36652203 ~ 36653482 (+) False xrcc3
TU257530 other downstream 294789 36922432 ~ 36949307 (+) False LOC120546470

Expression Profile