RNA id: TU257656


Basic Information

Item Value
RNA id TU257656
length 210
lncRNA type inter_gene
GC content 0.55
exon number 3
gene id LOC120546696
representative False

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 36843890 ~ 36865869 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CGGCCATGCTACCTCGCGGGTCATTTTCCCTCCCGAAATTACCGTTTTTTCGGACCAAACGGAGACGCTGCCCGCTGGACCTGTGGACACAGAAACGGAGACGTTTCAGGTAGATCTACaaaaGAACACAGAGGACACGGAGCCAGGAGACAACCTCTCCGAAGGGTCCAGTCTGAACAGCGCAGAGCGTCTGGATTTGCAGCAGCTTAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU257652 lncRNA upstream 9484 36834110 ~ 36834410 (+) True G190005
TU257647 lncRNA upstream 12300 36827553 ~ 36831594 (+) False LOC120546682
TU257648 lncRNA upstream 12300 36827553 ~ 36831594 (+) False LOC120546682
TU257639 lncRNA upstream 12835 36827553 ~ 36831059 (+) False LOC120546682
TU257637 lncRNA upstream 16984 36826698 ~ 36826910 (+) False LOC120546682
TU257668 lncRNA downstream 4851 36870560 ~ 36920945 (+) False LOC120546470
TU257667 lncRNA downstream 50916 36916625 ~ 36920945 (+) False LOC120546470
TU257527 lncRNA downstream 84519 36950228 ~ 36950678 (+) True G189943
TU257684 lncRNA downstream 105148 36970857 ~ 36971118 (+) True G190030
XM_039781784.1 mRNA upstream 18487 36797195 ~ 36825407 (+) True ubr7
XM_039781795.1 mRNA upstream 50407 36790619 ~ 36793487 (+) True tmem251
XM_039781739.1 mRNA upstream 69846 36757884 ~ 36774048 (+) False LOC120546642
XM_039781397.1 mRNA downstream 10070 36875779 ~ 36950069 (+) True LOC120546470
TU257569 other upstream 190412 36652203 ~ 36653482 (+) False xrcc3
TU257528 other upstream 302582 36536679 ~ 36541312 (+) True G189944
TU257496 other upstream 445654 36382908 ~ 36398240 (+) False LOC120546466
TU257465 other upstream 468060 36374300 ~ 36375834 (+) True G189897
TU257460 other upstream 629295 36213881 ~ 36214599 (+) True G189895
TU257530 other downstream 56723 36922432 ~ 36949307 (+) False LOC120546470

Expression Profile