RNA id: XM_039781001.1


Basic Information

Item Value
RNA id XM_039781001.1
length 2194
RNA type mRNA
GC content 0.45
exon number 2
gene id glrx5
representative True

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 10724470 ~ 10728525 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GAGAGTTTTAAGTGTGTTGACGACCGACAGACTTGGTTTTTACTCAGGCTCGTCCAGAAGCAGGTTAAGCAGTTGCAGCGACATTTTTACCTCCTCGTATAAAGATATAATTGACCAAAGATCATGAACAGTCTAATTAGATCCACTGCGAGGTGTCTGCGGTCGGGGGCGGCGGTCTATCCGCCTAGGCAGGCCGACGGACGCGTGTGGTCGGCCTCGGCCCGGTTCCTGTGCGCGTCAGCGGGCCTCCAGAAAGACCTTGGTGAGATGGTCAAGAAGGACAAAGTGGTGGTGTTCATGAAGGGGACGCCGGCTCAGCCCATGTGTGGCTTCAGCAATGCCGTGGTTCAGATCCTCCGGATGCACGGGGTGGACGACTACGCTGCGTACAACGTATTGGAGGACTCCGAGCTCAGAGAAGGAGTCAAGACCTTCTCCAACTGGCCCACGATCCCTCAGGTGTACTTCAGCGGCGAGTTTGTGGGGGGCTGCGACATCCTGCTCCAGATGCACCAGAACGGAGATCTGGTGGAGGAGTTAAAGAAGCTGGGCATCAGCTCTGCACTGCTGGAGGCTGAGAAAGAGTCCAAGTAGAGGGAGAGGATGAACTGCAAACAGCTGACAGGACAGAAGACGCATTTATCAGGTTtcatcccccctcccctcccctccctcagATGATGACATTATAAATCCAGAGCTCCTGCTTCACTGCTTATTCTCTTCTTAACACAAATAATGTACCTGGTGGGTGAGGAAGAAATAAAGGGTGGACCATGTCTTCCCAGGAATCCAAAATCAGTTTAAGCTAACACTCCACCCACATTTCTCAActgtaacagttttttttggggggggggggcagctgaaacaagttgctttttttttttgctgacgaCGGCTGCAAAAATGAACCGAAAGTTAAGTTTGAGGCCAAGACtcaaacaatgagctgaaagatgctataTAAAGCTCTATATGTGCGCTGGAAAACGGTGATAATCCTCTGTGGGTTCATAGTGGCAGCTTTAATATTTCCCTTAACACATGGAGGAAAACCATTGATCTTTCCTCCTGTACTTCCTACGTTTTGAATACTTTTCTATCCTATCGCGATTCACCAATTTCTGTACACTATCCTACaataaaatatttcaaacaaaaatcaatGGCAGCATAGTTTTTGGAATCGCAGGCTTTTCGTGACGAATACAGTGTTGAACGTCGAACTGTCAGAGACATCATTTCACATCGAGGTTGGACTTCTACTGCCAGAGGGAGGCCGTCCGGTTCCCTCCCTGGGTTTTAAATCAGTTTACACAAGAATGGCGTCAAACCTCTTATCATCTTGCCCTCTAAAAGCCCTGCTACCTCTACAGTCCACTCCCCGCACCACAGTCTGCGTAAGACCAAATGAGCCTCAGGGTGCACCAAGACTAAGTTCACGCTGCTTGGGTCCCACCAGGGAAACATGCCATTATACCAGAAAGCTTCCAAATGCACTGCCTGTAGCTACAGTATGCTGAAGTAAAAACACTGTTGATACATCACTGATTAATAAAGCTGATGTGGGTTCATTATAATGTAAATGTTTAGTTCAATATCTggtcaataataaaataaaaaaataaaacatctggtgAATGACATCTGTTTAATTTATGGACCACACCTCAGTGCTCAGTAACCCATGCATGCACTGTCCGTATAACTGATGGACCCGACCCCATTATTCCCTTTTGTTCTTCCTACCTGGAATCAAACCAAAATGTGTCCTGTTTTAATGTCTACACTGAAACGCTGAAacgcaacaaacatacaatgaTACCTTTTCTCTTATTCCTGAAGACTAATATACAGCACATTTGGACTAACAGAagcaggtatatatatatatatatatatatgaagtgTGTTGCGTCTGTTACAAGTCTGTGGTATTTGTTAATGTATCAAAGGAAAAGAGGGTTTTTTGTTTTGGAAGGGTggggatatatttttttttttgtctcactgAGAACCCCTGACCCTTATCAATCCTAATGTTCGTCCTGCTGCACACAGTTGTAATATCAAAGCAATGGGCATGTAGTCCACTGTAAGATATTGTACATTGAAAgcattttattaaatgtattttagctGCATGTAAATCCTGCACcaattaaatattttgtgacACAAATAAGCTGGA

Function

GO:

id name namespace
GO:0045454 cell redox homeostasis biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0009055 electron transfer activity molecular_function
GO:0015035 protein disulfide oxidoreductase activity molecular_function

KEGG:

id description
K07390 grxD, GLRX5; monothiol glutaredoxin

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU248541 lncRNA downstream 133132 10591080 ~ 10591338 (-) True G183534
TU248538 lncRNA downstream 158306 10565916 ~ 10566164 (-) True G183531
TU248537 lncRNA downstream 166351 10557487 ~ 10558119 (-) True G183530
TU248503 lncRNA downstream 490902 10220918 ~ 10233568 (-) True G183497
TU248497 lncRNA downstream 507344 10216351 ~ 10217126 (-) True G183492
TU248626 lncRNA upstream 26471 10754996 ~ 10780282 (-) True G183594
TU248658 lncRNA upstream 219291 10947816 ~ 10948114 (-) True G183616
TU248663 lncRNA upstream 235307 10963832 ~ 10964049 (-) True G183621
TU248683 lncRNA upstream 461129 11189654 ~ 11210793 (-) True G183639
TU248701 lncRNA upstream 718450 11446975 ~ 11447319 (-) True G183656
XM_039780998.1 mRNA downstream 15633 10693839 ~ 10708837 (-) True pla2g7
XM_039780999.1 mRNA downstream 15635 10693839 ~ 10708835 (-) False pla2g7
XM_039782864.1 mRNA downstream 58170 10662117 ~ 10666300 (-) True sf3b6
XM_039781966.1 mRNA downstream 113845 10455244 ~ 10610625 (-) False LOC120546776
XM_039781967.1 mRNA downstream 113845 10501920 ~ 10610625 (-) False LOC120546776
XM_039782719.1 mRNA upstream 817661 11546186 ~ 11548350 (-) True LOC120547228
XM_039781328.1 mRNA upstream 846948 11575473 ~ 11576057 (-) True LOC120546403
XM_039781838.1 mRNA upstream 891179 11619704 ~ 11634330 (-) True LOC120546716
XM_039782501.1 mRNA upstream 910321 11638846 ~ 11650060 (-) True LOC120547092
XM_039781106.1 mRNA upstream 931469 11659994 ~ 11673089 (-) True kcnk13b
XR_005636937.1 other downstream 113845 10501920 ~ 10610625 (-) False LOC120546776
TU248535 other downstream 203060 10520717 ~ 10521410 (-) True G183528
TU248390 other downstream 623409 10099603 ~ 10101061 (-) False LOC120546281
TU248116 other downstream 1590998 9129573 ~ 9133472 (-) True G183176
TU247995 other downstream 1937253 8783788 ~ 8787217 (-) False LOC120546397
TU248695 other upstream 645583 11374108 ~ 11374615 (-) True G183650
unassigned_transcript_1080 other upstream 1854644 12583169 ~ 12583241 (-) True trnat-ugu_2
TU249125 other upstream 2231973 12960498 ~ 13007868 (-) True LOC120547209
TU249198 other upstream 2465552 13194077 ~ 13215824 (-) False hmgn3
TU249194 other upstream 2477782 13206307 ~ 13215824 (-) False hmgn3

Expression Profile