RNA id: XM_039781015.1


Basic Information

Item Value
RNA id XM_039781015.1
length 1500
RNA type mRNA
GC content 0.47
exon number 8
gene id armc1l
representative True

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 17375197 ~ 17378628 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GCGTTAGCTTCTTTAGCTAGCCACAACGTTAACGCTAGCGCTacgacttgacttgacttgacatgacaatgtttaccagctagctaacgttaactccGTACCTTGATGTTCCTATCTTAAAACATACATTAGTGACCGTAACGTGGCTTAAATCATCCATTGAGTTACATTAACGTTAGTTAAATGCATAGCGTTAGCTAGACTAACgttataacgttaacgttagctagctagctagctagctagctatataaaCAGGTCTGGTAACTAAAAGGTAACAAAGATGATGGATGCACTGTCGGTGGTGCGTCAGCTGCGGGACCTGGCCTCTGAGCCGCAGAACCGAGAGGTGATAGTGCAGGACCAGGGCTGTCTCCCCGGGCTGGTTCTCTTCTTGGACCACCAGAACCCAGACGTGCTACTCGCAACTCTTCAGACCCTGCGCTACTTGGCTGAGTTGTCTCCCAACATCTCCACCATGAAGAATGAACTGGGTATGATGGTGAGCTTGGAGAATCTAACTGGGAGGGAGGGCCTGTCTATTGACATCACAGCCTTGGCCAAGGAGGTGTTTGACATTCTGAGTGCACCTGCTAATCTTACGCGCACGcctgagagggagaggagaaagaaatcCCAGTTTTTTATCAACTCCACCAACAAGAAGGCCAAGTCTGTAACTCTGCACATCCAGGGGCTGGATAGCACTGACACGCGAGGCTTGTGTGAGGAGGCTCTTCTGAAGGTCAGAGGAGTGATCAGCTTCACCTTCCAGATGGCTTCCAAGAGATGCACCGTCCGCATCCGCTCAGACCTGCCCACTGagAGTCTGGCATCAGCCATCGCTGCCACTAAGGTGTTGTCAGCCCAGCAGGTGGTGAAGAATGAGGCAGGAGAAGACGTTTTCATCCCTCTGAACCCATGTGGAGGGGAAGTGCAGCAAAACTCAGCTCTACCAGACTACCTCccagaagaagaggagagccCAGAGAAGGAGGTCGACCGAGCGGTTTCCCGCACCACAGCTAAGCAAGATTCTAATGGAAGCTGGCTCAACGCCGCCGCCGGTTTCCTCACCAAAACTTTCTACTGGTGAAACTGGCGCAGTTTAATTCCCTGAGATCCAGTGATGTAAAGTTGTGCTAAAAGACTAACTGCTGTGTGTTTTGAATGAGTGGACATTACTGGATGTTAGCACACCAAAGGCCTACATCCTGGCGTTGTGTGCATGGTCTGAACTTCACCAACTTGCCATCAGTTCTCAGAAAAACTACACATTGTCAATTCACAAGCACTTCGGATTTTTGCTTTATTATGGTTATCTGGTTACTAATGGATGATCACACACTTGAAAAATATCTTGTCTCTGGACTTGCATAATGCTGTTTTCTATCCAGTATTCtcattaaatgtaaatattttcttaATCTGTCAAACTGTCCATTTTCTCCTgacatgtaaaaagaaaaaaaaaaaagactttgttGCTACTTTTCTACA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU250616 lncRNA downstream 12294 17362009 ~ 17362903 (-) True G185039
TU250603 lncRNA downstream 42224 17312485 ~ 17332973 (-) True G185031
TU250586 lncRNA downstream 105593 17266359 ~ 17269604 (-) True LOC120547341
TU250583 lncRNA downstream 105593 17266417 ~ 17269604 (-) False LOC120547341
TU250524 lncRNA downstream 204935 17169689 ~ 17170262 (-) True G184989
TU250631 lncRNA upstream 17843 17396471 ~ 17399451 (-) True G185054
TU250610 lncRNA upstream 47576 17426204 ~ 17432964 (-) True G185035
XR_005636850.1 lncRNA upstream 140143 17518771 ~ 17521010 (-) True LOC120546280
TU250691 lncRNA upstream 146890 17525518 ~ 17527365 (-) True G185094
TU250721 lncRNA upstream 187041 17565669 ~ 17578288 (-) True G185123
XM_039781014.1 mRNA downstream 64750 17307112 ~ 17310447 (-) True iyd
XM_039781813.1 mRNA downstream 68971 17291166 ~ 17306226 (-) True sec63
XM_039781812.1 mRNA downstream 87556 17269861 ~ 17287641 (-) True scml4
XM_039781811.1 mRNA downstream 87559 17269861 ~ 17287638 (-) False scml4
XM_039782915.1 mRNA downstream 105563 17267365 ~ 17269634 (-) False LOC120547341
XM_039781166.1 mRNA upstream 87290 17465918 ~ 17474896 (-) False myb
XM_039781165.1 mRNA upstream 87290 17465918 ~ 17474894 (-) True myb
XM_039781167.1 mRNA upstream 87290 17465918 ~ 17474891 (-) False myb
XM_039782086.1 mRNA upstream 246087 17624715 ~ 17631351 (-) False tbpl1
XM_039782084.1 mRNA upstream 246087 17624715 ~ 17631351 (-) False tbpl1
XR_005637006.1 other downstream 539214 16829796 ~ 16835983 (-) False gpatch2
XR_005636881.1 other downstream 857325 16490650 ~ 16517872 (-) False snap91b
TU250064 other downstream 1583639 15788914 ~ 15791558 (-) False si:dkey-177p2.18
TU249614 other downstream 2796028 14571755 ~ 14579169 (-) False naa30
TU249578 other downstream 2876827 14472201 ~ 14498370 (-) True G184299
XR_005637059.1 other upstream 383328 17761956 ~ 17762038 (-) True LOC120547356
XR_005637061.1 other upstream 383770 17762398 ~ 17762482 (-) True LOC120547359
XR_005637056.1 other upstream 384105 17762733 ~ 17762808 (-) True LOC120547353
TU250856 other upstream 386177 17764805 ~ 17766640 (-) False zgc:153284
TU250853 other upstream 386294 17764922 ~ 17766640 (-) False zgc:153284

Expression Profile