RNA id: XM_039781106.1


Basic Information

Item Value
RNA id XM_039781106.1
length 2447
RNA type mRNA
GC content 0.52
exon number 3
gene id kcnk13b
representative True

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 11659994 ~ 11673089 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TGGACGCGTTTTGGATTAACGGTTTAGACTTGGACTGCACATAGAAGCTTCgtgagcaacaacaacaaaaaaaaaatgccaaatcCACAGCCTTGGGAGAACTCGATCATAACCTGCCTGAACAACAATTTGCTTATAATGCGCAGGACTTTTCTGtcgtaaaaaactaaaaatcttGTCAACGTTTATTTTGCCCGAGGACTgtgcgtttttttatttttattattattattattttatttttttggtattCGAGGCTAACCATGCCACAGGTCCCTCGCTGCAGCTTCACAACGGGGACAATAACAGCAACATAATGGCATGTAGGagcggctgctgctgcggcTCCGGTCCCATAAACGAGGATAACGCGAGGTTTCTGTTGCTGGCGTTGTTCATCGTCATTTACCTCCTGTGTGGGGCCGCAGTCTTCTCCGCGCTGGAGCAGCCCAAGGAGCGCGAGGCCAACGAGCGCTGGGCGCAGAGGTTCGAGCAGTTCAGCCACAAGTACAACCTGAGTAAGAAAGACCTGAATAACTTCCTCAGGAACTACGAGGAGGCGAACGTGGCGGGCATCCGCGTGGACACGATCAGACCTCGGTGGGACTTCACCGGCGCTTTTTACTTCGTGGGAACTGTGGTGTCAACCATTGGGTTTGGGATGACCACTCCTGCCACCATTGGAGGAAAAGTCTTCCTGATGTTCTACGGCCTGCTCGGCTGCGCGGCCACCATCCTCTTCTTCAACCTCTTTCTGGAGCGCGTCATCACCGTCATCGCCGTCGTCCTCAAGTCCTGTCACCAGCGACGCCACAACAAAGCTGTGCTCGCACCGAATGGCCGGCAGGTCTCGGAGGGGAACAGAGCAGGCGAAGTTGGAGGAAGTGGTGGGGGGAAAGGGGAAGATCTGGCCGGCTGGAAGCCTTCGGTCTACTGCGTCATGCTCATTCTGGGAGCGGCGGCCATCTTGGTGTCCTGCTGCGCCTCGCTCATGTACTCGGCGGCCGAGGGCTGGGGCTACCTGGACTCGCTCTACTTCTGCTTCGTGGCCTTCAGCACCATCGGCTTCGGCGACATGGTGAGCAGCCAGCGGGCCGTCTACGAGGGCCACGCCACGGTCGCGTATCGCCTGGGCAACTTCTTCTTCATCCTCACCGGCGTCTGCTGCATCTACTCCCTCTTCAACATCATCTCCATCGTCATCAAGCAGGTCCTCAACTGGCTGCTGAGGAGGCTGGAGGCCCCCTGCCGCTGCTGTTTCCCCAGGAGGGGTCATCACCCGCACCGGCACCCGCGGCGGAACGTGGTGGCCCCGGGCCACCTGCGCGCCCGCAGGGACCCCTCCATCGAGACAGACGCCATCAATGAGAGCGAGACTGACAATGGGCGCAGGATGTCTGGGGAGATGATCTCCATGAGGGACTTCCTGGCCGCCAACAAGGTGAATCTGGCAATTATGCAGAAGCAGCTTTCAGAGATGGCCATCGGGCACCCGCGCCAGTCCAGCTCCAATTCACGTCAGAACGGATTCTCAGGAGGGGTGGGCGCCCTTGGCATCATGAACAACCGGCTGGCAGAGACGAGCGTGGACAGATAGGGGAAACAGCGTGAATCCTTTTTTCAAAGGATACAAAAGGCTGAGGGGATAAGTCGAGTATGGACAAATTGACACTGAGCCCTTCCTTCCTTAAAAAGGGAAGACTTGCTTGGTGTACCAAGACAAAACGTACGACTGCATAATTCATCTATTCCATTGAGACCCCCCAGCAGCTACCACCTCAGCCCATCTTCCTGTCAAGAACATGGCTGCATAAATGATGCGTGATGGTTTGCTGGAGTCTCACATCTGGACTAGGCTCAGTGTGCCGGAATGTTCCCCTGTGAGGAACTCAGTTTCCatggtgataaaaaaaaaaccctgcctAGAGCCCCTGTATCTAAGCCTTAAAACATGATATGATGCACTACATGCTAATTCACATCTAACCGCAACTTCCACTACTTTACAATACTCAATATGACTCTAACCACGTCCATACTGTGGCAGGCATAGAAATAGCTTCATTAAAATGGGTGTTTGGTGTCTAACAGTGGttattaggcctacattaagcTGGGTGTCATGTAGCAACGATGAGCCCAATTcatggatgaatgaatgttgACCTTTAATTCAAAAATGACTCAATTATGGTATTGATACTATCAATGGCACTCTATTCACATCATTTGTGACCATATGTTTCACAGCCATATGCCATTCAATAGCCTCCATCCTGGCACTGCTTTCATTCATTATCACGAAAGAATAGAagacaaaccccccccccctaaagACCTCATTACAAACCAAACAGACCTATGCCTAGCTGAATGGGAAGTGTTCGGAGTCTGAGAtgaaaccgttttttttttttttttttaagagactGCTGTTTTTACTGCTG

Function

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005267 potassium channel activity molecular_function

KEGG:

id description
K04922 KCNK13, K2P13.1; potassium channel subfamily K member 13

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU248810 lncRNA downstream 421 11659054 ~ 11659573 (-) True G183734
TU248808 lncRNA downstream 1032 11658438 ~ 11658962 (-) True G183732
TU248796 lncRNA downstream 69434 11586036 ~ 11590560 (-) True G183720
TU248740 lncRNA downstream 115929 11540514 ~ 11544065 (-) True G183685
TU248735 lncRNA downstream 122543 11536271 ~ 11537451 (-) True G183682
TU248823 lncRNA upstream 25963 11699052 ~ 11699965 (-) True G183747
TU248829 lncRNA upstream 74042 11747131 ~ 11747593 (-) True G183753
TU248866 lncRNA upstream 114912 11788001 ~ 11788321 (-) True G183781
TU248874 lncRNA upstream 194072 11867161 ~ 11869156 (-) True G183788
TU248878 lncRNA upstream 211488 11884577 ~ 11886506 (-) True G183792
XM_039782501.1 mRNA downstream 9934 11638846 ~ 11650060 (-) True LOC120547092
XM_039781838.1 mRNA downstream 25664 11619704 ~ 11634330 (-) True LOC120546716
XM_039781328.1 mRNA downstream 83937 11575473 ~ 11576057 (-) True LOC120546403
XM_039782719.1 mRNA downstream 111644 11546186 ~ 11548350 (-) True LOC120547228
XM_039781001.1 mRNA downstream 931469 10724470 ~ 10728525 (-) True glrx5
XM_039782028.1 mRNA upstream 220445 11893534 ~ 11918141 (-) True tshr
XM_039781091.1 mRNA upstream 354459 12027548 ~ 12358231 (-) False nrxn3b
XM_039781084.1 mRNA upstream 354459 12027548 ~ 12358230 (-) False nrxn3b
XM_039781082.1 mRNA upstream 354459 12027548 ~ 12358230 (-) False nrxn3b
XM_039781098.1 mRNA upstream 354459 12027548 ~ 12358230 (-) False nrxn3b
TU248695 other downstream 285379 11374108 ~ 11374615 (-) True G183650
XR_005636937.1 other downstream 1049369 10501920 ~ 10610625 (-) False LOC120546776
TU248535 other downstream 1138584 10520717 ~ 10521410 (-) True G183528
TU248390 other downstream 1558933 10099603 ~ 10101061 (-) False LOC120546281
TU248116 other downstream 2526522 9129573 ~ 9133472 (-) True G183176
unassigned_transcript_1080 other upstream 910080 12583169 ~ 12583241 (-) True trnat-ugu_2
TU249125 other upstream 1287409 12960498 ~ 13007868 (-) True LOC120547209
TU249198 other upstream 1520988 13194077 ~ 13215824 (-) False hmgn3
TU249194 other upstream 1533218 13206307 ~ 13215824 (-) False hmgn3
TU249195 other upstream 1533218 13206307 ~ 13215824 (-) False hmgn3

Expression Profile