Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039781522.1 |
| length | 1378 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 7 |
| gene id | aven |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053129.1 |
| NCBI id | CM020926.1 |
| chromosome length | 36987114 |
| location | 25609997 ~ 25650563 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0016070 | RNA metabolic process | biological_process |
| GO:0090304 | nucleic acid metabolic process | biological_process |
| GO:0006139 | nucleobase-containing compound metabolic process | biological_process |
| GO:0006725 | cellular aromatic compound metabolic process | biological_process |
| GO:1901360 | organic cyclic compound metabolic process | biological_process |
| GO:0034641 | cellular nitrogen compound metabolic process | biological_process |
| GO:0006259 | DNA metabolic process | biological_process |
| GO:0046483 | heterocycle metabolic process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU253790 | lncRNA | upstream | 83125 | 25526447 ~ 25526872 (+) | True | G187310 |
| TU253776 | lncRNA | upstream | 169454 | 25405717 ~ 25440543 (+) | False | G187299 |
| TU253780 | lncRNA | upstream | 175691 | 25434001 ~ 25434306 (+) | True | G187301 |
| TU253774 | lncRNA | upstream | 180089 | 25427095 ~ 25429908 (+) | True | G187299 |
| TU253718 | lncRNA | upstream | 270731 | 25338845 ~ 25339266 (+) | True | G187260 |
| TU253870 | lncRNA | downstream | 252375 | 25902938 ~ 25905402 (+) | True | G187378 |
| TU253934 | lncRNA | downstream | 279013 | 25929576 ~ 25935259 (+) | False | abracl |
| TU253932 | lncRNA | downstream | 279485 | 25930048 ~ 25933947 (+) | False | abracl |
| TU253941 | lncRNA | downstream | 316443 | 25967006 ~ 25967300 (+) | True | G187431 |
| TU253938 | lncRNA | downstream | 317643 | 25968206 ~ 25968925 (+) | False | LOC120546493 |
| XM_039781524.1 | mRNA | upstream | 5263 | 25597678 ~ 25604734 (+) | True | emc7b |
| XM_039781523.1 | mRNA | upstream | 13288 | 25589228 ~ 25596709 (+) | True | katnbl1 |
| XM_039782698.1 | mRNA | upstream | 241660 | 25351229 ~ 25368337 (+) | True | gpr176 |
| XM_039782516.1 | mRNA | upstream | 262512 | 25341777 ~ 25347485 (+) | False | LOC120547103 |
| XM_039781525.1 | mRNA | downstream | 130219 | 25780782 ~ 25809922 (+) | False | fmn1 |
| XM_039781526.1 | mRNA | downstream | 140205 | 25790768 ~ 25809922 (+) | True | fmn1 |
| XM_039781532.1 | mRNA | downstream | 180387 | 25830950 ~ 25836432 (+) | True | LOC120546553 |
| XM_039781267.1 | mRNA | downstream | 237706 | 25888269 ~ 25901582 (+) | True | clu |
| XM_039781268.1 | mRNA | downstream | 237706 | 25888269 ~ 25901582 (+) | False | clu |
| unassigned_transcript_1083 | other | upstream | 390057 | 25219868 ~ 25219940 (+) | True | trnat-ugu_3 |
| TU253601 | other | upstream | 600590 | 25004019 ~ 25009407 (+) | False | lama2 |
| TU253479 | other | upstream | 1102184 | 24506913 ~ 24507813 (+) | True | G187094 |
| TU253325 | other | upstream | 1526893 | 24079603 ~ 24083104 (+) | True | G186975 |
| XR_005636955.1 | other | upstream | 2021483 | 23578378 ~ 23588514 (+) | False | nfkbie |
| TU253978 | other | downstream | 377497 | 26028060 ~ 26030400 (+) | False | nudt14 |
| TU254022 | other | downstream | 626132 | 26276695 ~ 26281368 (+) | False | gareml |
| TU254081 | other | downstream | 795087 | 26445650 ~ 26452304 (+) | False | tfap2b |
| TU254083 | other | downstream | 795087 | 26445650 ~ 26452304 (+) | False | tfap2b |
| XR_005637060.1 | other | downstream | 1006778 | 26657341 ~ 26657503 (+) | True | LOC120547357 |
