RNA id: XM_039781795.1


Basic Information

Item Value
RNA id XM_039781795.1
length 1081
RNA type mRNA
GC content 0.56
exon number 2
gene id tmem251
representative True

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 36790619 ~ 36793487 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TCGCCAGAGACGGCCGCTGTGAGTGACGTCATCCCTGGGTGTCAGGTGACcaaacaggaagagagagacgACGAGACTCCCCGGTCGGAGCTTCCGGGACCCCGGGACCCACAGTGCGTTAAAACGAGCCTCCAGcagagttgtagtttaaaagaTTCAGCGCGAAGGAAGTATGGAGGATGATGAACTTCCGCCAGCGGCTGGGTTGGCTCTCCGTGGCGTTCTTCCTGCTGCTGAGCGTGGCGGCGGTGTACTACGTGTTTGAGGTTCGCAGCTTGAGTGTGGAGCGTGTGCAGAGAGGCCCGTCGGCCCCCCCCGCCTCCCCCAGCTGGGCCCAGAGCCTCGGCGCCCGCCTGCCGCCGCTTCCCGTATGGATGTGGGCGTCTGTCTTCCTGTTGCCGTACCTGCagctcttcctcttcctgttctCGTGCACGCGCGCTGACCCGCGCGCCATCGGCTACTGTGTACTTCCTGTCTGCCTTGCGCTGCTCTGCAGCCGCTGCGCTGCCCGCAAACCGGCCAATCACAGAGCTCCGTCGCTCATCCACACCTAGAagacacagccaatcacagagctcCATCACTCATCCACACCTAGaggacagccaatcacagagctaCAGCGAATCACAGAGCTCCGTCGCTCATCCACACCTAGaggacagccaatcacagagctcCGTCGCTCATCCACACCTAGAGGACACGACCAATCACAGAGCTCCGTCACTCATCCACACCTAGAggacacagccaatcacagagctcCGTCACTCATCCACACCTAGAGGACACGACCAATCACAGAGCTCCGTCACTCATCCACACCTAGAggacacagccaatcacagagcccAGTCGCCTCGGACAAcagactgtttgtttgtttgtgagaTTGTTCTATTCTCccgcgctgtgattggctgcagaaTGGGTTTGTTTGGTCAGTTACCTGAATCCCAAAACTATGTTGTATTTATGACGAGTCACATGACACATGCTGGTAACCATGACAACTTTATTGTGACGacagtaaaatgaaaaaaacaaataaaatgtgacGTTTTATAGAAAAGTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU257601 lncRNA upstream 15060 36706881 ~ 36775559 (+) True G189978
TU257608 lncRNA upstream 38993 36700485 ~ 36751626 (+) False G189981
TU257607 lncRNA upstream 38993 36748032 ~ 36751626 (+) True G189981
TU257610 lncRNA upstream 38993 36748032 ~ 36751626 (+) False G189981
TU257606 lncRNA upstream 38993 36748255 ~ 36751626 (+) False G189981
TU257636 lncRNA downstream 32589 36826076 ~ 36826284 (+) True G190000
XR_005636904.1 lncRNA downstream 33194 36826681 ~ 36831183 (+) True LOC120546682
XR_005636905.1 lncRNA downstream 33202 36826689 ~ 36831183 (+) False LOC120546682
TU257637 lncRNA downstream 33211 36826698 ~ 36826910 (+) False LOC120546682
TU257639 lncRNA downstream 34066 36827553 ~ 36831059 (+) False LOC120546682
XM_039781739.1 mRNA upstream 16571 36757884 ~ 36774048 (+) False LOC120546642
XM_039781740.1 mRNA upstream 16571 36757884 ~ 36774048 (+) False LOC120546642
XM_039781741.1 mRNA upstream 16571 36758539 ~ 36774048 (+) True LOC120546642
XM_039781745.1 mRNA upstream 44482 36725350 ~ 36746137 (+) True LOC120546644
XM_039781763.1 mRNA upstream 108786 36666093 ~ 36681833 (+) True LOC120546651
XM_039781784.1 mRNA downstream 3708 36797195 ~ 36825407 (+) True ubr7
XM_039781397.1 mRNA downstream 82292 36875779 ~ 36950069 (+) True LOC120546470
TU257569 other upstream 137137 36652203 ~ 36653482 (+) False xrcc3
TU257528 other upstream 249307 36536679 ~ 36541312 (+) True G189944
TU257496 other upstream 392379 36382908 ~ 36398240 (+) False LOC120546466
TU257465 other upstream 414785 36374300 ~ 36375834 (+) True G189897
TU257460 other upstream 576020 36213881 ~ 36214599 (+) True G189895
TU257530 other downstream 128945 36922432 ~ 36949307 (+) False LOC120546470

Expression Profile