Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039781947.1 |
| length | 1408 |
| RNA type | mRNA |
| GC content | 0.61 |
| exon number | 3 |
| gene id | LOC120546767 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053129.1 |
| NCBI id | CM020926.1 |
| chromosome length | 36987114 |
| location | 34008396 ~ 34013448 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0005886 | plasma membrane | cellular_component |
| GO:0005923 | bicellular tight junction | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005198 | structural molecule activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU256504 | lncRNA | upstream | 63812 | 33886415 ~ 33944584 (+) | True | G189294 |
| TU256503 | lncRNA | upstream | 64834 | 33886415 ~ 33943562 (+) | False | G189294 |
| TU256499 | lncRNA | upstream | 64834 | 33910022 ~ 33943562 (+) | False | G189294 |
| TU256580 | lncRNA | upstream | 70047 | 33938055 ~ 33938349 (+) | True | G189352 |
| TU256517 | lncRNA | upstream | 110823 | 33887512 ~ 33897573 (+) | True | G189302 |
| TU256710 | lncRNA | downstream | 33163 | 34046611 ~ 34047007 (+) | True | G189439 |
| XR_005636834.1 | lncRNA | downstream | 56153 | 34069601 ~ 34071742 (+) | True | LOC120546208 |
| XR_005637028.1 | lncRNA | downstream | 66811 | 34080259 ~ 34096714 (+) | True | LOC120547081 |
| TU256727 | lncRNA | downstream | 88063 | 34101511 ~ 34102289 (+) | True | G189450 |
| XR_005636863.1 | lncRNA | downstream | 89295 | 34102743 ~ 34104308 (+) | True | LOC120546319 |
| XM_039781945.1 | mRNA | upstream | 7860 | 33859152 ~ 34000536 (+) | True | LOC120546766 |
| XM_039781373.1 | mRNA | upstream | 151984 | 33846444 ~ 33856412 (+) | True | LOC120546446 |
| XM_039781371.1 | mRNA | upstream | 236994 | 33765353 ~ 33771402 (+) | True | LOC120546444 |
| XM_039780949.1 | mRNA | upstream | 342143 | 33629800 ~ 33666253 (+) | True | LOC120546181 |
| XM_039780971.1 | mRNA | upstream | 592310 | 33399801 ~ 33416086 (+) | True | LOC120546192 |
| XM_039781374.1 | mRNA | downstream | 5183 | 34018631 ~ 34035953 (+) | True | LOC120546447 |
| XM_039782426.1 | mRNA | downstream | 23608 | 34037056 ~ 34052641 (+) | True | LOC120547053 |
| XM_039782425.1 | mRNA | downstream | 25114 | 34038562 ~ 34052641 (+) | False | LOC120547053 |
| XM_039782427.1 | mRNA | downstream | 42532 | 34055980 ~ 34065783 (+) | True | LOC120547054 |
| XM_039782429.1 | mRNA | downstream | 42532 | 34055980 ~ 34065783 (+) | False | LOC120547054 |
| TU256520 | other | upstream | 21920 | 33965583 ~ 33986476 (+) | True | G189305 |
| TU256522 | other | upstream | 69009 | 33932064 ~ 33939387 (+) | True | G189307 |
| TU256516 | other | upstream | 147993 | 33859146 ~ 33860403 (+) | False | LOC120546766 |
| TU256542 | other | upstream | 237023 | 33765501 ~ 33771373 (+) | False | LOC120546444 |
| XR_005637066.1 | other | upstream | 244770 | 33763465 ~ 33763626 (+) | True | LOC120547364 |
| TU256875 | other | downstream | 449460 | 34462908 ~ 34464897 (+) | True | G189544 |
| TU256872 | other | downstream | 469416 | 34482864 ~ 34503755 (+) | True | G189541 |
| TU256921 | other | downstream | 472976 | 34486424 ~ 34487177 (+) | True | G189570 |
| XR_005637062.1 | other | downstream | 505840 | 34519288 ~ 34519426 (+) | True | LOC120547360 |
| XR_005637063.1 | other | downstream | 511440 | 34524888 ~ 34525026 (+) | True | LOC120547361 |
