RNA id: XM_039782387.1


Basic Information

Item Value
RNA id XM_039782387.1
length 2178
RNA type mRNA
GC content 0.45
exon number 13
gene id moxd1l
representative True

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 19097059 ~ 19102420 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TGACTTAGCATTTTTCACCTGTAGCCTATCACTTGAGTTCATCGAGCAAAGCAGGTGTGCCGGAGGAGGGTGGGAGGGTGTTTGGCAGCTCCACAGACAGTGGGTTCAGTTTGAAAAACGCCAACTTCACAGAGACATCATGCGCTCTCTGCTTCCTTTCCTCTACCTGTTCTCGGTCTGGACAAAAGGAGCCAGGGCGGCGGACCCCACCTTGCCCTTCATGGAGTATCTGGACCAGAACCATTTGGTCTGCCTGAAGTGGGGCTTTGATAACCCGCAAGGAAACATTACATTCAAGCTGGTAGTCAACACAACAGGCTGGGTGGGCTTTGGCTTCAGTCCGAACGGAGGCATGAAGGGGTCAGACATGGTCATAGGGGGAGTTGGACCCAGTGGAATCTACTTCACAGATGGATATGCCACAGGGAACTCCAAGCCCTTGGTAGACGAGCAGCAGAGCTACACTCTCCTCTCTATGACTGAAAGCGACGGTCAAACCATCATGACCTTTTGGAGGTCAATTCAGTCGTGTGACCGCCAAGACTTCCATATCACTGATAAACCCATTAAACTAATCTATGCCTATGGAATAACAGATGAGATTGCTTACCATGGGGATCGTACGGGCACCAAGGAAGTGAACCTGTTGAACTATAAGCCCAGGACGACCTCAACCAAACTCAACTATCTCAATGCAACAGTGGACAATATCACTATCCCTCAGAGTCGTACCTACTACCACTGCAAGGTCATGCAGTTTCcaaacttaaaaacaaaacatcataTATATCAGATTGAACCAGTGATTGAGAACGATGACATGGTGCATCACATGCTGCTGCACCGCTGCCCCACCTTTGTGACGAAGCCCTACGACAAGCCGTGCTTCATGGGCGACATGGGGGATGCCTGCTTCGGGGTGGTGGCTGCATGGGGCGTGGGAGCAGGGGCATATGATCTTCCAGAAAATGTGGGTATTCCTGTTGGAGGTGAAGACACATTCTATCGGCTTGAAATCCACTACAATAATCAAAACAGTAAAGCCGATAGGACAGACAGCTCAGGAATGAAACTGCACTATACAGCCCAACTCCGGCAGCATGATGCGGGCATCCTGACCACAGGTATGCTGCCACTTGAGCATATCCACTACCACATCCCTCCAAAAGCCACTCAATTCCACACCTACGGCGTCTGTAATACCACCCTCTTTTCACAGCTTTTGAATCCTGTGCCTGAATTGCAAGTGTTCGCTATGATACTGCACACTCACTTGGCTGGGAGGAAGGTCAGAGTTGGCCACTACAGAAATGGAGAGCAGATAGACTTCTTGGGTTTGGATGAAAACTTCAACTTTGAGTTTCAGCAGGTCATCAGTTTGGGAAACATCAAGACCATTAAGCAGAGTGATGAGATTGCAGTGGAGTGCACCTACAGTACTACCAATCGCACCAATGTCACGATGATGGGATTAGCAACTACTGATGAGATGTGCCTGGCCTTCCTTTTCTACTACCCTGCAATCAAGATCAACACATGTGTTAGCCACCCAAATACAAGCATGTCTAAGGACAAGAATGACATAGCTGCACAGGAGAGTTTACTAAAGACACTTCCACAAATTCAGTACATCTCTGATGACAATAGAAACTCATCATTTAACTTATATGGCACAGTCAGGGAGATGATGAAGACACCGACTGACACTTGTGAGAATAAAAACGCGGCAAGCAGACGCAGCACTTCCTGGATTATGAACCCAGCAGGAATCATGCTACTGCTACTCTGGATTGCAATGATGTAGCGTGGTTGTATGAGCAACAGCTCCAAACCATTGCAAtcttgattttaaaaaaaaggcacagtTGATAAAATATTATTCTAATCAACTAGCTATATTAAACTTTACAGGACAGGGTGTATAACATTttctatgatttatttttctccatGCATAGAACATCTTTTGTCTTTGGTATTGATTATTAATCACAGATTGAGTCATAGTATTAGTTACTTTcaaatgtatacatatacaaaatTACATTCATTAGGGTAGAAGGTTTTATCCATATTGCCTAACAATTTCTCATTTAGTCTATGCATACGCCGTGGCTATATGGCACTAACACTATATGCACTTATCACTGTTTGTGTACatgttgtatgttgtgtgta

Function

GO:

id name namespace
GO:0004497 monooxygenase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU251378 lncRNA upstream 13275 19082696 ~ 19083784 (+) True G185599
TU251371 lncRNA upstream 50952 19045414 ~ 19046107 (+) True G185593
TU251370 lncRNA upstream 53511 19043224 ~ 19043548 (+) True G185592
TU251369 lncRNA upstream 72481 19024264 ~ 19024578 (+) True G185591
TU251368 lncRNA upstream 74029 19022696 ~ 19023030 (+) True G185590
TU251440 lncRNA downstream 175687 19278107 ~ 19279357 (+) True G185656
TU251470 lncRNA downstream 252196 19354616 ~ 19427463 (+) False acbd3
TU251479 lncRNA downstream 265633 19368053 ~ 19373933 (+) False si:dkey-206f10.1
TU251505 lncRNA downstream 450854 19553274 ~ 19554235 (+) True G185696
TU251494 lncRNA downstream 470180 19572600 ~ 19576899 (+) True zgc:193593
XM_039781706.1 mRNA upstream 20577 19070669 ~ 19076482 (+) True si:ch211-203k16.3
XM_039781705.1 mRNA upstream 20577 19070669 ~ 19076482 (+) False si:ch211-203k16.3
XM_039781180.1 mRNA upstream 94029 18990946 ~ 19003030 (+) True prkg3
XM_039781179.1 mRNA upstream 107285 18982177 ~ 18989774 (+) True LOC120546316
XM_039781178.1 mRNA upstream 115881 18977830 ~ 18981178 (+) True ctsbb
XM_039781341.1 mRNA downstream 163 19102583 ~ 19126659 (+) True rps6kc1
XM_039781692.1 mRNA downstream 101939 19204359 ~ 19237033 (+) True LOC120546624
XM_039781693.1 mRNA downstream 102288 19204708 ~ 19237033 (+) False LOC120546624
XM_039781673.1 mRNA downstream 157842 19260262 ~ 19269398 (+) True smyd2b
XM_039781031.1 mRNA downstream 225587 19328007 ~ 19333616 (+) True LOC120546239
unassigned_transcript_1081 other upstream 164672 18932316 ~ 18932387 (+) True trnae-cuc_27
XR_005637008.1 other upstream 1042133 18020963 ~ 18054926 (+) True fndc4a
XR_005637007.1 other upstream 1044988 18020963 ~ 18052071 (+) False fndc4a
TU250889 other upstream 1179811 17916853 ~ 17917248 (+) True G185237
TU250755 other upstream 1410661 17682558 ~ 17686398 (+) True G185145
TU251420 other downstream 101734 19204154 ~ 19208096 (+) False LOC120546624
XR_005636888.1 other downstream 327175 19429595 ~ 19539308 (+) False nhsl1b
XR_005636889.1 other downstream 327175 19429595 ~ 19539208 (+) False nhsl1b
XR_005636890.1 other downstream 327176 19429596 ~ 19539208 (+) False nhsl1b
TU251521 other downstream 531863 19634283 ~ 19648156 (+) False acp1

Expression Profile