RNA id: XM_039782644.1


Basic Information

Item Value
RNA id XM_039782644.1
length 3089
RNA type mRNA
GC content 0.50
exon number 18
gene id ufl1
representative True

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 2590462 ~ 2613535 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CACTCTATGTTGACGTGTGCACTGTTCTCCTACATCCATGGTACGCTGTAGAGATCTGTCTTGTTAGCAAATAATCCGCTAGCTGGACACACTTCTTGATAGTGGATGGTTTAGGAAAAGCACTGACATCtgacaaacacatacactttTAATAATGGCGGCTGACTGGGAAGAAATCCGACGGCTTGCTGCTGATTTTCAGAGAGCACAGTTTGCTGACACAGTGCAAAGgCTGTCTGAGAGGAATTGTATTGAGATTATTGCAAAACTGGTCCAAGACAAGAAGCTGGATGTGGTGCACACACTGGATGGAAAGGAGTACATAACGCCGGCCCAGATCAGCAGGGAGATCCGAGATGAGCTCTACGTCCATGGAGGGCGAATCAACATCGTTGACCTCCAGCAGATTCTCAACGTGGATTGGGTCCATGTTGAAAACAGAGCGAGTGACATTGCGAAATCTGATAAAGGGGTTCAACTTGTTCTGGGACAACTTATTAATGACACGTACCTGGACCGATTGGCTGAGGAGGTGAATGACAAGCTGCAGGAAGCTGGCCTCATCAGTATTGCAGAACTATGTAAGATTTACGACCTCCCGGGAGATTTCTTATCTGAGAGTGGCAACATGGGAGCCTCAAAACAACTCTCAGATGACCTGAAAACAAAGACTGTTCAACATCATGGTTTAGGGGAAGGATACAGAAAGCTGTCTCAGAGATTTaagctctcagtttcaactgtgaGGATCATTGTGAGGAATTGGAAGACCAGAGGTATAGATGCCAAGAAGGACTGGGTGGACCTCTCCCCAGCAAACGGCTATCTAGAGTTTGATGCGTTGGTCAGACTGGGGATCCCGGACCCCTCCAGCTACATCAAGAAGCGCTTCAAGTCCAACAAGCTTCTGTTCCTCCGAGCCGCCTGCGTGGGTCAGGCTCTGGTGGACCAGGTGGAGGCCTCTATTGAGGAAGCTGTCAACTCCGCCACATGGACCGACATTCAGcCGATTCTGCCCAGCTGCCTGTCACTGGAGGACATTGGGATGCTGATCAGCCAGGCTATGAGAAACACCAACGTCCAGTCCTCCGCCAGAGTGCTGGGAGACACGGTCGTCGTCAGCGAGAAGTTCCTCAGCAACTGCCTCTCTTTATTTGATGAAGCCATGCAGCAGAAAGCTCAGAAGGAAGTCAAGAACAATCCAGTGTTTCTGATAACTGAAGACGACCTGAAGCAAGCATCCATGCTGACGGAGAGCTCAGCAACTTctaaaaaggaaaagagagaagcAGAGCGAAGGAAGAAGGCTACAGAGGGCAGTGGCAGTGTGAAATCAGGTGGAGGAGGCAACGCCCGAGAGATCAGGATTCGTAAAACCAAGAAGAAAGGGAGGAAAGATGAGGACAGCGATGAGGAAACCGGCCCGTCACAGCAAAATCGCAGTAAACAGACTGCAGCCCCTTTTATGGCCCAGGAAGAGATCGTAGCCGTTTTAGAGGACAGAGTGAGCGACTGCCCCGAAGAAATCCTCTCGGAGCTGGCCGAGCATTTAGTGAGGCCTCTTAATAACGCCTACCAGGAGGTGCTGCGGACGGTGTTCATGTCCTCCACCTGCTCTCCATCAAGGGCCAACAAGAAGAAGAGCATGAAGGACCTACAGGAGGAGATCTCCAGCCTGTACAACAACATCCGACTCTTTGAAAAGGGCTGCAAGTTCTTCTCTGATGATACCCAGGTCCACATTGCGAAGCACATCCTGAAGACCCTGTGCTCAGATGTCACCAACATCCTGGTCAACTTCCTGGCTGCTGACCTGATGATGTCAGTGGAGAACCCCAGCACCATCACCAACGAGGTCAGAGTGAAGATTTTGGGCAAACTGTCGGAGGAGACTAAAGGGCCTCTCATGAAGCTGCACAACTGCCTGAACGGCAAAACTATCGAAGACTTCCTGACCAACATAGAGATCTGTGCAGAGGTGTGTGGCTTCATGCTGAAGAAGGCGGACAAGAAAAAAGAGAGACAGGCCCTGTTCGTGCACCGTCAGGCTCTCAGTGAGCAGCTGAAGGAGACGGAGGACCCTGCTCTGGTGCTCCACCTGGCCAGCGTGCTGCTGTTTCAGGGCAGCACCCACAGCATGCTGCACGCTCCGGGACGCTGCGTGCCTCAGATCATCGGCACGCTCACCGGCCGAATACCCGCGgagcagcagcagctgctgtctGCGTACCAGAGCCTGGTGGTGAAGCAGCTGGTGAGCCAGAGTCAGAGCAGGAAGCAGGAGGAGGCGGCGGGCGAGGCCGAGGGCGAGGCGGAGCAGGACGACGAGGCCCGGAGCGTCCGCACACAGCTCGCGGCCCTGACTCCACAGGTCAAGGACCTGATACTGTCCCAGAAGAAGGCGTCTGTCACAGAGGACTGAACCCATTTCAAAGATTAGAGGAATAAATGTTGGAACTGAGGGGAGATTAACAGGGTTTCCCCCACAAAAGTTCTTTAGcccggtggcaagtgtctttttttgacaagggcccggctggggccagtcccagactgatggcagcattaatgtagagtCCAATAGTTTCAGTGATAACAGAATCGTGGACAGAATCACAAAattaagaatttaaaaaagctatagGACTGACtccatagggccctacattaagtgagtgctaaaagctaactggagatttgaaaaaaTATGACTACGTCTAAGTTTACAACCGAGCCACcctactgtaactgtagtttaaaaaatgtcttaaaaatacatgaataatTCCCAGTAGCTTAGCCCCGGTGGGGGGGGAACTTAGGCCCGGTGGGCCAACAGGCCTGTAATACACTGGGGGGGGGAACCCTAATTAATCTTTTTATGGTCTTAGCAGGGTTAGAAGTATTCAGATGAATACTTCTAACCCTGCTAGATCAGCTGGCAGTACTGTGATGTATCCATGTGGACATCATTCTAAATTATTAAAGGAAATTCCTGTGTGGGATGTCTCCCTGTAAACCCAATTAACATGAAAGTCCTCAATGAGGTTCTGATTTTAATGCGTTCATTAAagctcttctcttcctca

Function

GO: NA

KEGG:

id description
K22755 UFL1; E3 UFM1-protein ligase 1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU246358 lncRNA downstream 886 2588503 ~ 2589576 (-) True G181766
TU246344 lncRNA downstream 20230 2569825 ~ 2570232 (-) True G181756
TU246339 lncRNA downstream 29461 2558051 ~ 2561001 (-) True G181751
TU246335 lncRNA downstream 40530 2549507 ~ 2549932 (-) True G181747
TU246312 lncRNA downstream 91324 2497486 ~ 2499138 (-) True G181724
TU246359 lncRNA upstream 2246 2615781 ~ 2616093 (-) True G181767
TU246361 lncRNA upstream 25484 2639019 ~ 2639346 (-) True G181769
TU246389 lncRNA upstream 264113 2877648 ~ 2877848 (-) True G181793
TU246411 lncRNA upstream 390605 3004140 ~ 3005994 (-) True G181811
TU246417 lncRNA upstream 464112 3077647 ~ 3078267 (-) True G181814
XM_039781876.1 mRNA downstream 183307 2400734 ~ 2407155 (-) True col10a1b
XM_039782382.1 mRNA downstream 206377 2359433 ~ 2384085 (-) True frk
XM_039781100.1 mRNA downstream 265184 2322664 ~ 2325278 (-) True LOC120546265
XM_039781102.1 mRNA downstream 265408 2322664 ~ 2325054 (-) False LOC120546265
XM_039782716.1 mRNA downstream 426719 2035665 ~ 2163743 (-) True LOC120547226
XM_039782865.1 mRNA upstream 1026640 3640175 ~ 3644570 (-) True gja10b
XM_039782303.1 mRNA upstream 1048018 3661553 ~ 3678597 (-) True casp8ap2
XM_039782441.1 mRNA upstream 1159635 3773170 ~ 3822913 (-) False ankrd6b
XM_039782440.1 mRNA upstream 1159635 3773170 ~ 3822913 (-) False ankrd6b
XM_039782432.1 mRNA upstream 1159635 3773170 ~ 3822913 (-) False ankrd6b
unassigned_transcript_1007 other downstream 1736239 854151 ~ 854223 (-) True trnav-aac_19
unassigned_transcript_1005 other downstream 1742629 847762 ~ 847833 (-) True trnad-guc_21
unassigned_transcript_1002 other downstream 1748437 841954 ~ 842025 (-) True trnad-guc_20
unassigned_transcript_1000 other downstream 1753217 837174 ~ 837245 (-) True trnad-guc_19
unassigned_transcript_996 other downstream 1761928 828463 ~ 828534 (-) True trnad-guc_18
TU246464 other upstream 762230 3375765 ~ 3376108 (-) True G181860
TU246538 other upstream 995312 3608847 ~ 3610329 (-) True G181919
TU246718 other upstream 1278107 3891642 ~ 3893159 (-) False srp9
TU246726 other upstream 1293082 3906617 ~ 3912279 (-) True G182061
TU246722 other upstream 1295012 3908547 ~ 3914015 (-) True G182059

Expression Profile