Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039782751.1 |
| length | 1077 |
| RNA type | mRNA |
| GC content | 0.57 |
| exon number | 4 |
| gene id | lft1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053129.1 |
| NCBI id | CM020926.1 |
| chromosome length | 36987114 |
| location | 10226816 ~ 10229005 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0016049 | cell growth | biological_process |
| GO:0005576 | extracellular region | cellular_component |
| GO:0005160 | transforming growth factor beta receptor binding | molecular_function |
| GO:0008083 | growth factor activity | molecular_function |
| id | description |
|---|---|
| K04668 | LEFTY; left-right determination factor |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU248497 | lncRNA | downstream | 9690 | 10216351 ~ 10217126 (-) | True | G183492 |
| TU248447 | lncRNA | downstream | 49247 | 10176900 ~ 10177569 (-) | True | G183457 |
| TU248448 | lncRNA | downstream | 51461 | 10174736 ~ 10175355 (-) | True | G183458 |
| XR_005637025.1 | lncRNA | downstream | 160530 | 10064593 ~ 10066286 (-) | True | LOC120547073 |
| TU248365 | lncRNA | downstream | 178584 | 10047957 ~ 10048232 (-) | True | G183383 |
| TU248537 | lncRNA | upstream | 328482 | 10557487 ~ 10558119 (-) | True | G183530 |
| TU248538 | lncRNA | upstream | 336911 | 10565916 ~ 10566164 (-) | True | G183531 |
| TU248541 | lncRNA | upstream | 362075 | 10591080 ~ 10591338 (-) | True | G183534 |
| TU248626 | lncRNA | upstream | 525991 | 10754996 ~ 10780282 (-) | True | G183594 |
| TU248658 | lncRNA | upstream | 718811 | 10947816 ~ 10948114 (-) | True | G183616 |
| XM_039782756.1 | mRNA | downstream | 18491 | 10178309 ~ 10208325 (-) | True | kif26bb |
| XM_039782754.1 | mRNA | downstream | 52838 | 10148075 ~ 10173978 (-) | True | cnstb |
| XM_039782755.1 | mRNA | downstream | 53494 | 10148075 ~ 10173322 (-) | False | cnstb |
| XM_039782752.1 | mRNA | downstream | 89040 | 10136000 ~ 10137776 (-) | True | LOC120547244 |
| XM_039781122.1 | mRNA | downstream | 125764 | 10099478 ~ 10101052 (-) | True | LOC120546281 |
| XM_039782062.1 | mRNA | upstream | 117995 | 10347000 ~ 10379127 (-) | True | fzd3a |
| XM_039782064.1 | mRNA | upstream | 119136 | 10348141 ~ 10379127 (-) | False | fzd3a |
| XM_039782063.1 | mRNA | upstream | 119136 | 10348141 ~ 10378735 (-) | False | fzd3a |
| XM_039782068.1 | mRNA | upstream | 169797 | 10398802 ~ 10449410 (-) | False | fam49a |
| XM_039782069.1 | mRNA | upstream | 169797 | 10398802 ~ 10449410 (-) | False | fam49a |
| TU248390 | other | downstream | 125755 | 10099603 ~ 10101061 (-) | False | LOC120546281 |
| TU248116 | other | downstream | 1093344 | 9129573 ~ 9133472 (-) | True | G183176 |
| TU247995 | other | downstream | 1439599 | 8783788 ~ 8787217 (-) | False | LOC120546397 |
| TU247804 | other | downstream | 2201772 | 8024715 ~ 8025044 (-) | True | G182977 |
| TU247776 | other | downstream | 2460430 | 7761565 ~ 7766386 (-) | True | G182952 |
| XR_005636937.1 | other | upstream | 272915 | 10501920 ~ 10610625 (-) | False | LOC120546776 |
| TU248535 | other | upstream | 291712 | 10520717 ~ 10521410 (-) | True | G183528 |
| TU248695 | other | upstream | 1145103 | 11374108 ~ 11374615 (-) | True | G183650 |
| unassigned_transcript_1080 | other | upstream | 2354164 | 12583169 ~ 12583241 (-) | True | trnat-ugu_2 |
| TU249125 | other | upstream | 2731493 | 12960498 ~ 13007868 (-) | True | LOC120547209 |
