RNA id: XM_039782854.1


Basic Information

Item Value
RNA id XM_039782854.1
length 1041
RNA type mRNA
GC content 0.44
exon number 7
gene id fkbp3
representative True

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 14703467 ~ 14706436 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gaagaaaaagcagcTACGCAGGAGCATGGATGGTGGATGTATGCGCAGGAGGATCAAATTCAAACCAGTTCGCTTACTAAAATGGCAGATGAAGTAACACGAGAGTGGAGCGATGAGCAGCTCAAAAGTGACGCTTTCCCCAAAAAAGACATTATTACGTTCATTCAGGACAATGCAGCACACTCGttccTCAATGAGCACAAGCTGCTGggaaacataaaaaatgttGCTAAAACGGCAAAGAAAGAACAACTGATTATTGCCTACAATCAGCTCTTTGAGAGCAAAAAATTTAAAGGCACAGAGCCAATTGAAGATGTGACCGAGCAGGTTAAAGCAGTGAAAATTGAAGTAAAGTCCAAAGAAGCTCCGGCAGAGGTTGTGGATGAGGGTCCGCCAAAGTACACCAAGTCCGTGCTGAAGAAAGGGGACAAGACCAACTTTCCAAAGAAAGGCGAAAATGTGAGCTGCTGGTACACTGGTACCTTGGAGGATGGAACTGTCTTCGACACCAATGTCCCCAAAAcggagagaaagaagaagcaaACTAAACCACTGACCTTCAAAGTTGGCCTGGGCAGAGTCATCAGAGGATGGGATGAGGCCTTACTGACGATGAGCAAGGGTGAAATTGCTCGATTGGAGATTGAACCAGAGTGGGCCTACGGAAGGAAGGGTCTACCCGACTCAAAAATTCCTCCCAATGCAAAGCTGATCTTTGAAGTTGAAGTGGTGGCTGTGGATTAACTGGCAACTGCTGGCCAGCATGCATTGCATTTCAAGGGCAGAGCGAAAAAATTCTCAATGGCCTTGCTGTAAAGATTCAAGTTAAAATGGCATTTGGATTGTGTTCCTACTCTGTCTCATTCATCACCATGTTAAAAGAAATGATTGACCCAATTATTACAGCGTTTTGGCCAAAATGTGATGGCTTGTCAATAATGTACATATGAGACACCCTGAAACCTTATTCTCtgcattttcttttgttcttttgcaTGTACAATGTATATGATTAAATAAACCTGTTTCAGAGACGAA

Function

GO:

id name namespace
GO:0000413 protein peptidyl-prolyl isomerization biological_process
GO:0006457 protein folding biological_process
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function

KEGG:

id description
K09570 FKBP3; FK506-binding protein 3

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU249654 lncRNA downstream 1286 14699684 ~ 14702181 (-) True G184354
TU249656 lncRNA downstream 1286 14699684 ~ 14702181 (-) False G184354
TU249666 lncRNA downstream 13527 14689306 ~ 14689940 (-) True G184360
TU249658 lncRNA downstream 26407 14671894 ~ 14677060 (-) True G184356
TU249642 lncRNA downstream 35886 14667135 ~ 14667581 (-) False LOC120547045
TU249695 lncRNA upstream 334873 15041309 ~ 15041536 (-) True G184381
TU249700 lncRNA upstream 357402 15063838 ~ 15068284 (-) True LOC120546290
XR_005636854.1 lncRNA upstream 357812 15064248 ~ 15068279 (-) False LOC120546290
TU249721 lncRNA upstream 403805 15110241 ~ 15111442 (-) False rps29
TU249728 lncRNA upstream 425781 15132217 ~ 15138715 (-) True G184404
XM_039782856.1 mRNA downstream 23374 14677540 ~ 14680093 (-) True arf6a
XM_039782416.1 mRNA downstream 35866 14657177 ~ 14667601 (-) True LOC120547045
XM_039782747.1 mRNA downstream 90521 14571380 ~ 14612946 (-) True naa30
XM_039781333.1 mRNA upstream 85677 14792113 ~ 14929662 (-) True LOC120546409
XM_039782493.1 mRNA upstream 403804 15110240 ~ 15111479 (-) True rps29
XM_039782226.1 mRNA upstream 415393 15121829 ~ 15128493 (-) True wdr20b
XM_039782227.1 mRNA upstream 415393 15121829 ~ 15125145 (-) False wdr20b
XM_039782229.1 mRNA upstream 418131 15124567 ~ 15128493 (-) False wdr20b
TU249614 other downstream 124298 14571755 ~ 14579169 (-) False naa30
TU249578 other downstream 205097 14472201 ~ 14498370 (-) True G184299
TU249319 other downstream 1212339 13481924 ~ 13491128 (-) False mfsd2b
TU249306 other downstream 1235402 13458616 ~ 13468065 (-) True fkbp1b
TU249197 other downstream 1487643 13206307 ~ 13215824 (-) False hmgn3
TU250064 other upstream 1082478 15788914 ~ 15791558 (-) False si:dkey-177p2.18
XR_005636881.1 other upstream 1784214 16490650 ~ 16517872 (-) False snap91b
XR_005637006.1 other upstream 2123360 16829796 ~ 16835983 (-) False gpatch2
XR_005637059.1 other upstream 3055520 17761956 ~ 17762038 (-) True LOC120547356
XR_005637061.1 other upstream 3055962 17762398 ~ 17762482 (-) True LOC120547359

Expression Profile