RNA id: TCONS_00070957



Basic Information


Item Value
RNA id TCONS_00070957
length 470
lncRNA type antisense
GC content 0.53
exon number 2
gene id XLOC_036310
representative True

Chromosome Information


Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 16062172 ~ 16064410 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


TAAACCCTATACTGTAAATCTATCTGAAATGATGCGTCTGTATTTTGCTGTGCCAGGCTGGCGACAGCTGGAAGACACAGGAATCTCCCGCCCCCGTTCCCCCACTCTGCTGTGCTGGAGCCTGGGGCGTGTTGGCATGTAGCCTGTAGTGTGTGGGCTGTCTGGGAGGAGTGTGCATGTGGAAACGAACGGAGCCCCTGTAAATCTGGGACACCCCAACGAAGCGACGTCAGACCCCGCATACTAGATGACAACACTGGCAGCCACCCCAGGGAACGCTGAGATCCCACGCTCACTTGGAACTGCTGGAGCTGCATGGAGCCAGTGGCTAATGCCAAGCTAACCGCAAGGCTGAATGCGAAACACATCACGACGTCGAATTATGTGAGGAAGTTGATGTTCCCTGCAATCACCACGGTAGCTAATTCCTGCTATTCTATCAGACTTTTTCCCCCAATACCAATTTCTCC

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000155553

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00072410 lncRNA downstream 810703 15251183 ~ 15251469 (-) True XLOC_036303
TCONS_00072409 lncRNA downstream 980507 15078036 ~ 15081665 (-) True XLOC_036301
TCONS_00072408 lncRNA downstream 1271451 14783214 ~ 14790721 (-) True XLOC_036300
TCONS_00070943 lncRNA downstream 1483404 14578115 ~ 14578768 (-) True XLOC_036299
TCONS_00072407 lncRNA downstream 1566826 14491293 ~ 14495346 (-) True XLOC_036297
TCONS_00072411 lncRNA upstream 153844 16218254 ~ 16254661 (-) True XLOC_036311
TCONS_00072412 lncRNA upstream 199520 16263930 ~ 16268947 (-) True XLOC_036313
TCONS_00072413 lncRNA upstream 502138 16566548 ~ 16584612 (-) True XLOC_036318
TCONS_00072414 lncRNA upstream 506109 16570519 ~ 16577742 (-) False XLOC_036319
TCONS_00072415 lncRNA upstream 506109 16570519 ~ 16577747 (-) False XLOC_036319
TCONS_00070955 mRNA downstream 70371 15633454 ~ 15991801 (-) True XLOC_036308
TCONS_00070953 mRNA downstream 541265 15502785 ~ 15520907 (-) True XLOC_036306
TCONS_00070952 mRNA downstream 663412 15311289 ~ 15398760 (-) True XLOC_036305
TCONS_00070949 mRNA downstream 756644 15287424 ~ 15305528 (-) False XLOC_036304
TCONS_00070950 mRNA downstream 769975 15287628 ~ 15292197 (-) False XLOC_036304
TCONS_00070958 mRNA upstream 192810 16257220 ~ 16259063 (-) True XLOC_036312
TCONS_00070959 mRNA upstream 210368 16274778 ~ 16406440 (-) True XLOC_036314
TCONS_00070960 mRNA upstream 360312 16424722 ~ 16464453 (-) True XLOC_036315
TCONS_00070961 mRNA upstream 405948 16470358 ~ 16515127 (-) False XLOC_036316
TCONS_00070962 mRNA upstream 406582 16470992 ~ 16499508 (-) False XLOC_036316
TCONS_00070956 other downstream 145845 15916210 ~ 15916327 (-) True XLOC_036309
TCONS_00070954 other downstream 429325 15632732 ~ 15632847 (-) True XLOC_036307
TCONS_00070951 other downstream 756649 15292367 ~ 15305523 (-) True XLOC_036304
TCONS_00070936 other downstream 1610389 14414353 ~ 14451783 (-) False XLOC_036294
TCONS_00070922 other downstream 1967656 14092794 ~ 14094516 (-) True XLOC_036286
TCONS_00070966 other upstream 501427 16565837 ~ 16566479 (-) True XLOC_036317
TCONS_00070975 other upstream 545838 16610248 ~ 16610319 (-) False XLOC_036322
TCONS_00070978 other upstream 546704 16611114 ~ 16611194 (-) False XLOC_036322
TCONS_00070980 other upstream 546917 16611327 ~ 16611411 (-) False XLOC_036322
TCONS_00070982 other upstream 547256 16611666 ~ 16611747 (-) False XLOC_036322

Expression Profile


//