Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_005636949.1 |
| length | 487 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 3 |
| gene id | LOC120546804 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053129.1 |
| NCBI id | CM020926.1 |
| chromosome length | 36987114 |
| location | 6868475 ~ 6871244 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU247576 | lncRNA | downstream | 111643 | 6756575 ~ 6756832 (-) | True | G182789 |
| XR_005636950.1 | lncRNA | downstream | 135763 | 6732157 ~ 6732712 (-) | True | LOC120546805 |
| TU247561 | lncRNA | downstream | 151402 | 6716745 ~ 6717073 (-) | True | G182775 |
| TU247555 | lncRNA | downstream | 157334 | 6710594 ~ 6711141 (-) | True | G182769 |
| TU247548 | lncRNA | downstream | 195827 | 6671241 ~ 6672648 (-) | True | G182762 |
| TU247622 | lncRNA | upstream | 55816 | 6927060 ~ 6934023 (-) | True | G182828 |
| TU247625 | lncRNA | upstream | 55816 | 6927060 ~ 6934023 (-) | False | G182828 |
| XR_005636945.1 | lncRNA | upstream | 68708 | 6939952 ~ 6940460 (-) | True | LOC120546800 |
| XR_005636944.1 | lncRNA | upstream | 68743 | 6939987 ~ 6940460 (-) | False | LOC120546800 |
| TU247647 | lncRNA | upstream | 172472 | 7043716 ~ 7044084 (-) | True | G182848 |
| XM_039781984.1 | mRNA | downstream | 67682 | 6762711 ~ 6800793 (-) | True | meis2b |
| XM_039781999.1 | mRNA | downstream | 403673 | 6462940 ~ 6464802 (-) | True | LOC120546794 |
| XM_039781991.1 | mRNA | downstream | 601002 | 6232742 ~ 6267473 (-) | False | cgrrf1 |
| XM_039782002.1 | mRNA | upstream | 573617 | 7444861 ~ 7588065 (-) | False | cnih3 |
| XM_039782001.1 | mRNA | upstream | 573617 | 7444861 ~ 7588065 (-) | False | cnih3 |
| XM_039782000.1 | mRNA | upstream | 573617 | 7444861 ~ 7588065 (-) | True | cnih3 |
| XM_039780984.1 | mRNA | upstream | 1178214 | 8049458 ~ 8126664 (-) | False | opn5 |
| XM_039780983.1 | mRNA | upstream | 1178214 | 8049458 ~ 8126664 (-) | True | opn5 |
| TU247550 | other | downstream | 167358 | 6700491 ~ 6701117 (-) | True | G182764 |
| TU247260 | other | downstream | 956566 | 5911312 ~ 5911909 (-) | True | G182502 |
| TU247229 | other | downstream | 1075537 | 5790289 ~ 5792938 (-) | True | G182474 |
| TU246981 | other | downstream | 2065005 | 4798921 ~ 4803470 (-) | False | smim8 |
| unassigned_transcript_1029 | other | upstream | 155898 | 7027142 ~ 7027214 (-) | True | trnak-uuu_18 |
| unassigned_transcript_1030 | other | upstream | 158730 | 7029974 ~ 7030046 (-) | True | trnak-uuu_19 |
| unassigned_transcript_1031 | other | upstream | 160403 | 7031647 ~ 7031723 (-) | True | trnak-uuu_20 |
| unassigned_transcript_1032 | other | upstream | 162086 | 7033330 ~ 7033402 (-) | True | trnak-uuu_21 |
| TU247776 | other | upstream | 890321 | 7761565 ~ 7766386 (-) | True | G182952 |
