RNA id: TU266801


Basic Information

Item Value
RNA id TU266801
length 745
RNA type TUCP
GC content 0.59
exon number 3
gene id dact2
representative False

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 25008474 ~ 25013249 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

agcagcagcagcagcagcagcagcagcatcacaaCAGCAGTAGCAGAAAGACAGTAACTAACGAAGTCTGAGCAAAGGACGTTTCTTCAACAGCATCTTATTTCTGGATATGCCCGGACGCCGCTCTCCAGCATGCTGAGCAGGAAGGGGTCTAGTGCAGGGATGATGACCGCTGCTGCAGCGGGAATAGACCGCAGCAGGGTCGGGGAGAGGCTGCAGGCTGCTCTGGCCGGGCTGCAGGAGCTTCATCTGCTGAAGGACAGACAGAGCGACATGGTGAGCTGGGCGCTGCGGATGGACCGAGAGGAGCCGGCCACTGCTGTCCACGCAGGCCCGGAGAGTCCCAGGATGATGGGGACTGAGGAACAGCGGCTGGAGGCGACCCTGACAACCCTGAAACAACAGCTGTCTCGTCTTCGGAAACAGGATGTAGGCCTGAAGACTCACTTGCAGCAGCTGGATCAACAGATCAGTGAGCTGAAGCTGGATGTGAGCAAGGCCTCCACAGAGCAGTTGGAGAGTGACAGCAGGCCAAGTTCAGGCTTCTATGAGCTCAGCGATGGCGGCTCTTGCTCGTTGTCCAACTCCTGCACCTCTGTGTACAGCGAGTGCCTGTCATCTTCCCAGACAAGCCTTCTCCTCCTTCCCACGAGCCCTGCTAATTCCCACATCAGCCCGCCATCACACCTAGACGTATGCCGCCGGCGTTCTGCTGACGAGAGCACTACCCagcccaacccccccc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU266792 lncRNA upstream 59480 24947838 ~ 24949032 (+) True G196485
TU266788 lncRNA upstream 95044 24873802 ~ 24913468 (+) True G196481
TU266782 lncRNA upstream 160822 24847114 ~ 24847690 (+) True G196476
TU266781 lncRNA upstream 164660 24843443 ~ 24843852 (+) True G196475
TU266762 lncRNA upstream 366455 24641158 ~ 24642057 (+) False G196457
TU266850 lncRNA downstream 100634 25111395 ~ 25113349 (+) True LOC120547601
TU266852 lncRNA downstream 100634 25111395 ~ 25117367 (+) False LOC120547601
TU266845 lncRNA downstream 102259 25113020 ~ 25117367 (+) False LOC120547601
TU266848 lncRNA downstream 102259 25113020 ~ 25117367 (+) False LOC120547601
TU266849 lncRNA downstream 106317 25117078 ~ 25119122 (+) False LOC120547601
XM_039783126.1 mRNA upstream 31692 24954712 ~ 24976820 (+) True smoc2
XM_039783128.1 mRNA upstream 31692 24954712 ~ 24976820 (+) False smoc2
XM_039783129.1 mRNA upstream 31692 24954712 ~ 24976820 (+) False smoc2
XM_039783127.1 mRNA upstream 31692 24954713 ~ 24976820 (+) False smoc2
XM_039783130.1 mRNA upstream 31692 24954713 ~ 24976820 (+) False smoc2
XM_039783618.1 mRNA downstream 22711 25033472 ~ 25054947 (+) True lrrfip2
XM_039783625.1 mRNA downstream 22711 25033472 ~ 25054947 (+) False lrrfip2
XM_039783622.1 mRNA downstream 22711 25033472 ~ 25054947 (+) False lrrfip2
XM_039783631.1 mRNA downstream 22712 25033473 ~ 25054947 (+) False lrrfip2
XM_039783624.1 mRNA downstream 22712 25033473 ~ 25054947 (+) False lrrfip2
TU266740 other upstream 439345 24564550 ~ 24569167 (+) True G196439
XR_005637109.1 other upstream 640913 24357926 ~ 24367599 (+) True LOC120547848
XR_005637111.1 other upstream 1402938 23562283 ~ 23605574 (+) False disc1
XR_005637123.1 other upstream 2339045 22647914 ~ 22669467 (+) False tasp1
TU265655 other upstream 3493384 21514526 ~ 21515128 (+) True G195653
TU267128 other downstream 602646 25613407 ~ 25620675 (+) True prdx3
XR_005637133.1 other downstream 806490 25817251 ~ 25824677 (+) False LOC120548053
unassigned_transcript_1122 other downstream 971984 25982745 ~ 25982838 (+) True trnai-uau_2
TU267544 other downstream 1652398 26663159 ~ 26663785 (+) True G197053
TU267563 other downstream 1714998 26725759 ~ 26735787 (+) False tmem254

Expression Profile