RNA id: XM_039783081.1


Basic Information

Item Value
RNA id XM_039783081.1
length 939
RNA type mRNA
GC content 0.40
exon number 3
gene id mrpl14
representative True

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 22070881 ~ 22072916 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

AGTATTCATTAATTAGCTAAATTCTAATGCATGTTGTGTTTATCAGCTAGCTCGACTAAAGGCGGTCGGTCGCATGTTGTTGACGCTACGCTTTTGACATTGGCATGGAGCGTGATAGAAGGCTGACACAGTAGTCGCTGTAATTATGGCTTTCCCCCTGCTTTCAAAATCTCTAACTGGGCTTCTTGTGGAGTCATCGTCTATAATTCATCGCAGGACCTTTAGTGTATCTGCTGTTGCAGCAGCCATTCAAAAGATGACAAGAGTGCGTGTAGTGGACAACAGCTCTCTTGGAAATACACCATATCACCGACCCCCAAGAGTGATCCATGTCTACACCAAGAATGGTGTAGGAAAAGTTGGTGACAAAGTGTTGCTTGCCATTAAAGGACAGAAGAAGAAAGCGCTCATCGTTGGACACAAGATGCCTGGAGAACGCATGAGTCCGCGCTTTGATTCGAACAATGTTGTTCTGATTGAGGACAATGGAAACCCTACAGGAACAAGGATTAAGGTTCCTATACCCACACATCTACGTAAAGTAGAGGGAGATTACGCCAAAGTCCTAGCAATTGCTAGTTCATTTGTTTAATAACCGCATTCTGTACTGTGAtttgagatatactgtatattgtaaatCTGCTTGACTTTGTATATGAACATTTTATGCTTGTATATGTTCTTGTCTTCACTAAACTTTAAAAAGGAACATACACCCAGTCACAATTATTGTCTCTATATAGAATCCTGTTAATGTATGTAATAGACACAAACCTTTGTCaacatgtttggcattttacaGAGGCCTCTCTGTGCTTACAATAAATATAACTTTTAGCTTTAAGGCATAGCATAGGAGTTTCTTGGGCAGTTTGAGCAGCCAAATGTGGGTCAAACTCATGTTATTATGAACAcaataaacaaaacagaaagcaTGAA

Function

GO:

id name namespace
GO:0006412 translation biological_process
GO:0005840 ribosome cellular_component
GO:0003735 structural constituent of ribosome molecular_function

KEGG:

id description
K02874 RP-L14, MRPL14, rplN; large subunit ribosomal protein L14

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU265785 lncRNA upstream 14294 22052531 ~ 22056793 (+) True G195749
TU265743 lncRNA upstream 21275 21965685 ~ 22049812 (+) False G195711
TU265742 lncRNA upstream 99677 21965685 ~ 21971410 (+) True G195711
TU265714 lncRNA upstream 289648 21779247 ~ 21781439 (+) True G195687
TU265712 lncRNA upstream 292011 21731052 ~ 21779076 (+) True G195685
TU265797 lncRNA downstream 8213 22081129 ~ 22083740 (+) True G195757
TU265814 lncRNA downstream 52634 22125550 ~ 22126288 (+) True G195771
TU265827 lncRNA downstream 69309 22142225 ~ 22144422 (+) False G195783
TU265830 lncRNA downstream 69309 22142225 ~ 22144422 (+) True G195783
TU265978 lncRNA downstream 73387 22146303 ~ 22146792 (+) True G195881
XM_039784427.1 mRNA upstream 37858 22025958 ~ 22033229 (+) False LOC120548288
XM_039784426.1 mRNA upstream 37858 22029408 ~ 22033229 (+) True LOC120548288
XM_039783320.1 mRNA upstream 270993 21790970 ~ 21800094 (+) True LOC120547713
XM_039783321.1 mRNA upstream 270993 21791093 ~ 21800094 (+) False LOC120547713
XM_039784102.1 mRNA upstream 282182 21787187 ~ 21788905 (+) True mrps6
XM_039783032.1 mRNA downstream 15191 22088107 ~ 22094223 (+) False LOC120547561
XM_039783031.1 mRNA downstream 15192 22088108 ~ 22094223 (+) True LOC120547561
XM_039783749.1 mRNA downstream 26390 22099306 ~ 22101867 (+) True cfl1l
XM_039783871.1 mRNA downstream 58205 22131121 ~ 22133520 (+) True mgme1
XM_039784015.1 mRNA downstream 77032 22149948 ~ 22153326 (+) True ephx5
TU265655 other upstream 555959 21514526 ~ 21515128 (+) True G195653
XR_005637114.1 other upstream 739800 21318610 ~ 21331287 (+) False fbxo11a
TU265472 other upstream 1317278 20752773 ~ 20753809 (+) True G195518
TU265393 other upstream 1540772 20529767 ~ 20530315 (+) True G195448
unassigned_transcript_1121 other upstream 1692804 20378212 ~ 20378283 (+) True trnaw-cca_26
XR_005637123.1 other downstream 574998 22647914 ~ 22669467 (+) False tasp1
XR_005637111.1 other downstream 1489367 23562283 ~ 23605574 (+) False disc1
XR_005637109.1 other downstream 2285010 24357926 ~ 24367599 (+) True LOC120547848
TU266740 other downstream 2491634 24564550 ~ 24569167 (+) True G196439
TU266801 other downstream 2935596 25008512 ~ 25010761 (+) False dact2

Expression Profile