Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_005637133.1 |
| length | 1354 |
| RNA type | transcript |
| GC content | 0.56 |
| exon number | 5 |
| gene id | LOC120548053 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053130.1 |
| NCBI id | CM020927.1 |
| chromosome length | 36824488 |
| location | 25817251 ~ 25826429 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0005882 | intermediate filament | cellular_component |
| GO:0005198 | structural molecule activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU267222 | lncRNA | upstream | 4810 | 25812215 ~ 25812441 (+) | True | G196788 |
| TU267208 | lncRNA | upstream | 22843 | 25779526 ~ 25794408 (+) | True | G196782 |
| TU267118 | lncRNA | upstream | 142347 | 25594496 ~ 25674904 (+) | False | zgc:110045 |
| XR_005637158.1 | lncRNA | upstream | 232674 | 25501529 ~ 25584577 (+) | True | LOC120548233 |
| TU267083 | lncRNA | upstream | 317971 | 25497004 ~ 25499280 (+) | False | G196696 |
| TU267300 | lncRNA | downstream | 80043 | 25904720 ~ 25907869 (+) | True | G196841 |
| TU267292 | lncRNA | downstream | 87084 | 25911761 ~ 25939959 (+) | True | G196836 |
| TU267365 | lncRNA | downstream | 165791 | 25990468 ~ 25992621 (+) | True | G196898 |
| XR_005637095.1 | lncRNA | downstream | 199243 | 26023920 ~ 26069456 (+) | True | LOC120547661 |
| TU267388 | lncRNA | downstream | 275815 | 26100492 ~ 26101022 (+) | True | G196921 |
| XM_039784346.1 | mRNA | upstream | 39208 | 25769647 ~ 25778043 (+) | True | ttl |
| XM_039784569.1 | mRNA | upstream | 58933 | 25740125 ~ 25758318 (+) | False | ikzf1 |
| XM_039784566.1 | mRNA | upstream | 58933 | 25740191 ~ 25758318 (+) | False | ikzf1 |
| XM_039784565.1 | mRNA | upstream | 58933 | 25740192 ~ 25758318 (+) | False | ikzf1 |
| XM_039784564.1 | mRNA | upstream | 58933 | 25740193 ~ 25758318 (+) | True | ikzf1 |
| XM_039783523.1 | mRNA | downstream | 36154 | 25860831 ~ 25888074 (+) | True | xpo1b |
| XM_039783524.1 | mRNA | downstream | 38122 | 25862799 ~ 25887388 (+) | False | xpo1b |
| XM_039783525.1 | mRNA | downstream | 38618 | 25863295 ~ 25888074 (+) | False | xpo1b |
| XM_039783526.1 | mRNA | downstream | 40372 | 25865049 ~ 25888074 (+) | False | xpo1b |
| XM_039784661.1 | mRNA | downstream | 137678 | 25962355 ~ 25969516 (+) | True | haao |
| TU267128 | other | upstream | 196576 | 25613407 ~ 25620675 (+) | True | prdx3 |
| TU266801 | other | upstream | 806490 | 25008512 ~ 25010761 (+) | False | dact2 |
| TU266740 | other | upstream | 1248084 | 24564550 ~ 24569167 (+) | True | G196439 |
| XR_005637109.1 | other | upstream | 1449652 | 24357926 ~ 24367599 (+) | True | LOC120547848 |
| XR_005637111.1 | other | upstream | 2211677 | 23562283 ~ 23605574 (+) | False | disc1 |
| unassigned_transcript_1122 | other | downstream | 158068 | 25982745 ~ 25982838 (+) | True | trnai-uau_2 |
| TU267544 | other | downstream | 838482 | 26663159 ~ 26663785 (+) | True | G197053 |
| TU267563 | other | downstream | 901082 | 26725759 ~ 26735787 (+) | False | tmem254 |
| XR_005637113.1 | other | downstream | 1101741 | 26926418 ~ 27109140 (+) | False | LOC120547882 |
| XR_005637159.1 | other | downstream | 3288011 | 29112688 ~ 29177494 (+) | True | LOC120548242 |
