Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00000595 |
| length | 777 |
| lncRNA type | sense_intronic |
| GC content | 0.36 |
| exon number | 2 |
| gene id | XLOC_000346 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007112.7 |
| NCBI id | CM002885.2 |
| chromosome length | 59578282 |
| location | 29311527 ~ 29312559 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0018958 | phenol-containing compound metabolic process | biological_process |
| GO:0006082 | organic acid metabolic process | biological_process |
| GO:1901615 | organic hydroxy compound metabolic process | biological_process |
| GO:0009712 | catechol-containing compound metabolic process | biological_process |
| GO:0006584 | catecholamine metabolic process | biological_process |
| GO:0015081 | sodium ion transmembrane transporter activity | molecular_function |
| ensembl_id | ENSDART00000152716 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00000591 | lncRNA | upstream | 126258 | 29183972 ~ 29185269 (+) | True | XLOC_000342 |
| TCONS_00000585 | lncRNA | upstream | 130879 | 29174195 ~ 29180648 (+) | True | XLOC_000340 |
| TCONS_00000588 | lncRNA | upstream | 131593 | 29178145 ~ 29179934 (+) | False | XLOC_000341 |
| TCONS_00000587 | lncRNA | upstream | 131593 | 29178145 ~ 29179934 (+) | False | XLOC_000341 |
| TCONS_00000577 | lncRNA | upstream | 240171 | 29068649 ~ 29071356 (+) | False | XLOC_000337 |
| TCONS_00000596 | lncRNA | downstream | 131893 | 29444452 ~ 29445719 (+) | True | XLOC_000347 |
| TCONS_00000597 | lncRNA | downstream | 138906 | 29451465 ~ 29452733 (+) | True | XLOC_000348 |
| TCONS_00002842 | lncRNA | downstream | 187749 | 29500308 ~ 29501034 (+) | True | XLOC_000349 |
| TCONS_00000598 | lncRNA | downstream | 195088 | 29507647 ~ 29508473 (+) | True | XLOC_000350 |
| TCONS_00000607 | lncRNA | downstream | 493935 | 29806494 ~ 29809496 (+) | True | XLOC_000355 |
| TCONS_00000593 | mRNA | upstream | 40054 | 29267841 ~ 29271473 (+) | True | XLOC_000344 |
| TCONS_00000592 | mRNA | upstream | 83134 | 29211540 ~ 29228393 (+) | True | XLOC_000343 |
| TCONS_00000590 | mRNA | upstream | 108838 | 29183962 ~ 29202689 (+) | False | XLOC_000342 |
| TCONS_00000586 | mRNA | upstream | 131597 | 29178117 ~ 29179930 (+) | False | XLOC_000341 |
| TCONS_00000589 | mRNA | upstream | 131994 | 29178331 ~ 29179533 (+) | True | XLOC_000341 |
| TCONS_00000599 | mRNA | downstream | 202601 | 29515160 ~ 29519002 (+) | True | XLOC_000351 |
| TCONS_00000600 | mRNA | downstream | 351777 | 29664336 ~ 29743640 (+) | False | XLOC_000352 |
| TCONS_00000601 | mRNA | downstream | 425863 | 29738422 ~ 29743635 (+) | False | XLOC_000352 |
| TCONS_00000602 | mRNA | downstream | 429284 | 29741843 ~ 29743469 (+) | True | XLOC_000352 |
| TCONS_00000603 | mRNA | downstream | 447119 | 29759678 ~ 29764056 (+) | False | XLOC_000353 |
| TCONS_00000579 | other | upstream | 231191 | 29068662 ~ 29080336 (+) | False | XLOC_000337 |
| TCONS_00000565 | other | upstream | 1309590 | 27977370 ~ 28001937 (+) | False | XLOC_000332 |
| TCONS_00000567 | other | upstream | 1315916 | 27984393 ~ 27995611 (+) | True | XLOC_000332 |
| TCONS_00000557 | other | upstream | 1580547 | 27713349 ~ 27730980 (+) | False | XLOC_000329 |
| TCONS_00000518 | other | upstream | 3191903 | 26111385 ~ 26119624 (+) | True | XLOC_000317 |
| TCONS_00000608 | other | downstream | 519200 | 29831759 ~ 29860373 (+) | False | XLOC_000356 |
| TCONS_00000617 | other | downstream | 853394 | 30165953 ~ 30166065 (+) | True | XLOC_000360 |
| TCONS_00000618 | other | downstream | 914832 | 30227391 ~ 30227505 (+) | True | XLOC_000361 |
| TCONS_00000628 | other | downstream | 1643366 | 30955925 ~ 30965004 (+) | True | XLOC_000366 |
| TCONS_00000632 | other | downstream | 1744681 | 31057240 ~ 31063850 (+) | True | XLOC_000367 |
