RNA id: XM_039784295.1


Basic Information

Item Value
RNA id XM_039784295.1
length 2996
RNA type mRNA
GC content 0.45
exon number 4
gene id bag3
representative True

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 25191819 ~ 25197871 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

AACTTCCAGCCCACTTTTCCACGTCACTTCAAGGAATCTTTAAAGCGTCCGTCGCCAGTATAAAATGTTCCAGCACTACTGAACAGCCAGCAACATGAACGGCATGAAGACACAGTCTCCGATACTGATAATGGCCAACAATGACAACGACCCTCTTCCCCTCGGTTGGGAAGTCAAAATTGACCCTCAGACTGGATGGCCCTTCTTTGTGGATCACAATAACCGCACGACAACCTGGAATGACCCGCGACACGACACGAAAAAGGTCAGAGAAGTGTCAGCAAATGGCCCTAACATACCACCAGAAGCGAGCCCTCAGGAGATACAGAAAAGCTTTGTGAGGGAGATGAAGCACCCCATTCTGCGCCCAGGTTATGTTCCTATCCCTGTCTTCCATGATGGTGCAGACCTAAGGCAGCAACAGCATCCATGTTATTCCTACATCCAGCCAACCACCGCACAGAATATCCGTCAGACACCTTCCCCGACACCGGGGCTCCACTGCAGGCCCAGATCACCTTTACACGGACCTACAGATAACTGCTCCCCTGAGCCTGGAAAGGCCAGCTCACCAGTTTCGCCAACAACAGAGGTTTACTCTGCCCCGCATCACCAACCCCCACGGCCCAGCAGCACTGGTCTTCAAGCAGGTTACATCCCCATCCCGGTGATTCATGAGGGTGGAGgaggacaaacacaaacacacgctcaGTTAAATCCCTCTGTCTACTCTCAGCGCGTCCCCTACTCAGAGCACCAGCAGCCCTTTCATCGCCTTCAAACCGACGAATGGCCTGGCTACTCTTCAGCAATGCCGCCTCCCCGGGAAAGAGCTTCTCCAACACTGTTTCCCCAGCATCGCGATGCTACTTCTATTCACCTCCAACCTCATATTAGAAGCCATTCACCTATTATAACACAGGTGCTGGGAGAAAGGCCACAGGCTCAGCAGCATGTCCTCACAAGAGACCCGCCCCAGAAAATGGAGCAGGAACAACAGAGCACTCAGCAGAAACCCGAGAACACGCAGCCATTGCACACAGAAGCAGACGTCCAAAAGCCTCAACAACCTCAACAGTTCCAGCAACCTCCACCTCAGCAACCTCAACAGTTCCAGCAGCCTCCACATCAGCAACCTCAACAGTTCCAGCAACCTCAGCAATTCCAGCAGCCACAGCAGTTTCAGCAGACACCGCCTCAGACATATCCACAGCCTCAACATCCTGAACAGTTAAAGCAGTCGCCGCAACAGTTCCAGCAGCCCCAGAAACCAGAGCAACCACAACAACATACTGCAGATATCACAGTTCAAATACCTCCAAAACCTGAGGCCCAGGACATGACAGCTGTTCCCCCAGAGGTCCCACCTGTAAAGGTTGAGGCTGAACAGGCTGCTCAGTGTCCAGTCCACCCCGGCTTGGCTAAGGTACAGCAGATAGTCGGACGGGTTGCTAAACTGGAGCAGGAGGTGAAGTGTTTTGATGGAAAGAAGAATGATAAGAAATACTTGTTACTGGAGGAGCTGTTGACCAAAGAGCTTTTAGCACTGGACTCGGTTGACCCAGAGGGTCGTGTAGATGTACGACAGGCAAGACGGGATGGAGTCCGTCGTGTTCAGAACATACTGGAAGAACTGGAGCAACTGCAGGAGCAGCCAGCCAGGCCTGCCAGCGAGACCGCGATGGAGGGAGACAACCTGACACAGAAAGGAGAGCCCAGAATGATCACCAAGGAGAATGTTGAGCTGGCAAAGGAGATATCATAATGACTTAATAATCAACAGGGTAGCAGGGTTAACTTGCTGTAAATTTGATAGTGAACAAGTCCACTCCAGCTAACTCTCCTTCTACTCTATCTACAGCATTTGTGGAAGTTGCATGCATTGATTAACAGTGTTGGTATTTCCTGCCATTCAGCACATAATTGATGGTATCTCACTGCAATCATGTTTTTCAAGCCAATGGTGTTTCCTTCTGTGTTGTGCCAATGTCTTCGTAATAAGACAGCTGTCATGATCAAGATGTTGACAACAATTTCTAGTTACATTCAAGTTTGAATAAGAGGCCTTTATCAATAAATGGAAGAAAAGTAGAAGTATTTTCTTAAGAAATGTTATGTGTGGTTGCCTTTTGTCTTGATCAAATATTGTATGGAGCTTTTCTTAATCCAGTCAGCTAATCAGTTTGTACACAAGTGCAAACATTGGGGCTTTAAGGCAGAACAGAAAAGCAGTCAACAGAAAAGCTTTTTCCCCTTTATAGCTACATGGCCACGTTGGAGCTGCTTTGTCACAGAACACAGTGAATATGTTTATTAGATGCTGCTTTTTGGTGCATTACTCATTTTGCCGTCTTTGCACTTTGCCATCATTAAATGTATCGTGCTGAAAGATCAGCAGCACTTCATTTGAAGTATATAAGTTACACAAGTTTTGATTGATGTGTTTGAGTGTTTGTATGTGCATTGGTTTACTTGTTATttcgagaaaaaaaatatatatatcagtatttatatcattatatagtattttggtacatttatgAATGTGTAATGACAAATGGAGGTGAGATGTGTATCTTACTTGAGATGTCAGACAATCAGCACTTGGTGCTAATGAAGAATCACAGTTTAAGATTGTCAGAATGTATAACTACCACAGCCACAATCTGTAATAACACTAACACAAAACTGGCATATAAGCCTTAAATATGCCAAATGTAAGAAAGTGCCCTATTCTTAAAGAGATGAAGTGCAAGAAAACGTCAGTATGTCATTTAAAAAGGTTCAACATTATTGTTAGGTTTTCCAATTGTTTGTTTGGTCATTTTCAGTATAATACGATCATAAGCCATCATCTGCAAGGCAACTGCCTAACATACATTTACAAATAATGGATTGTGGTGTAGTTTTAATCACTGTTTATGAGTAGCAGACTGATGCATTGTTGAAAGCAAATCACGTTGGTAtgtttgaaaataaattttATTTGACATGGA

Function

GO: NA

KEGG:

id description
K09557 BAG3; BCL2-associated athanogene 3

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU266908 lncRNA upstream 2140 25189430 ~ 25189679 (+) True G196563
TU266903 lncRNA upstream 10006 25178159 ~ 25181813 (+) True G196558
TU266891 lncRNA upstream 47587 25143165 ~ 25144232 (+) False cacul1
XR_005637083.1 lncRNA upstream 72695 25117090 ~ 25119124 (+) False LOC120547601
TU266849 lncRNA upstream 72697 25117078 ~ 25119122 (+) False LOC120547601
TU266954 lncRNA downstream 21676 25219547 ~ 25219914 (+) True G196595
TU267020 lncRNA downstream 120395 25318266 ~ 25320869 (+) True G196648
TU267076 lncRNA downstream 229772 25427643 ~ 25433896 (+) True G196690
TU267084 lncRNA downstream 296502 25494373 ~ 25495505 (+) False LOC120548229
TU267082 lncRNA downstream 298797 25496668 ~ 25499150 (+) True G196696
XM_039784114.1 mRNA upstream 14360 25171104 ~ 25177459 (+) True pkd2l1
XM_039784234.1 mRNA upstream 22769 25167925 ~ 25169050 (+) True atoh7
XM_039784272.1 mRNA upstream 27190 25144557 ~ 25164629 (+) True mypn
XM_039784767.1 mRNA upstream 47565 25139047 ~ 25144254 (+) True cacul1
XM_039784103.1 mRNA upstream 53270 25131454 ~ 25138549 (+) True sirt1
XM_039784597.1 mRNA downstream 668 25198539 ~ 25213504 (+) True inpp5f
XM_039784598.1 mRNA downstream 668 25198539 ~ 25210811 (+) False inpp5f
XM_039784596.1 mRNA downstream 668 25198539 ~ 25210811 (+) False inpp5f
XM_039784599.1 mRNA downstream 5701 25203572 ~ 25213504 (+) False inpp5f
XM_039784600.1 mRNA downstream 24554 25222425 ~ 25232512 (+) True LOC120548364
TU266801 other upstream 181058 25008512 ~ 25010761 (+) False dact2
TU266740 other upstream 622652 24564550 ~ 24569167 (+) True G196439
XR_005637109.1 other upstream 824220 24357926 ~ 24367599 (+) True LOC120547848
XR_005637111.1 other upstream 1586245 23562283 ~ 23605574 (+) False disc1
XR_005637123.1 other upstream 2522352 22647914 ~ 22669467 (+) False tasp1
TU267128 other downstream 415536 25613407 ~ 25620675 (+) True prdx3
XR_005637133.1 other downstream 619380 25817251 ~ 25824677 (+) False LOC120548053
unassigned_transcript_1122 other downstream 784874 25982745 ~ 25982838 (+) True trnai-uau_2
TU267544 other downstream 1465288 26663159 ~ 26663785 (+) True G197053
TU267563 other downstream 1527888 26725759 ~ 26735787 (+) False tmem254

Expression Profile