RNA id: TU270195



Basic Information


Item Value
RNA id TU270195
length 725
lncRNA type inter_gene
GC content 0.44
exon number 2
gene id G199272
representative True

Chromosome Information


Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 803026 ~ 803805 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ctctgtttctcttttctttctctctctctcctgtttctctctcttttctctctctctgtcctctctccatccctccatctctctctgtctctctctctctttttctctctctctccttctttctccatcccgccttctccctccctctctatctctctgtttctcttttctttctctctctccccctgtttctctctcttttctctctccatccctccttctccctctctctctgtcctctctccatccctccctctctctctctgtctctctctctttctctctctctcctttctccatcccgccttctccctccctctctatctctctgtttctcttttctttctctctctctccctgtttctttctcttttctctctctctgtcctctctccatccctccttctccctccctctctctgttctctctccatccctccttctccctccatctctctctgtctctctctctctttttctctctctctccttctttctccatccctcctccctccctctcttactttctttaacttattgaaccaatttccactttttcaactattcttcagcttcagctaaagacttcacaatgttctacatattttgtcatttttcagcttttaaagccaacaatttagcgtcaactttgaactttttaacgatttccactttttcaactattctctctacttcaacttcttcttacagatttcagctattca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU270156 lncRNA downstream 173866 628811 ~ 629160 (-) True G199245
TU270155 lncRNA downstream 174231 628592 ~ 628795 (-) True G199244
TU270146 lncRNA downstream 210796 591999 ~ 592230 (-) True G199235
TU270141 lncRNA downstream 279395 523344 ~ 523631 (-) True G199231
TU270140 lncRNA downstream 281223 521484 ~ 521803 (-) True G199230
TU270199 lncRNA upstream 21473 825278 ~ 839372 (-) True G199275
XR_005637349.1 lncRNA upstream 74618 878423 ~ 885819 (-) True LOC120549208
TU270237 lncRNA upstream 147900 951705 ~ 952239 (-) True G199300
TU270263 lncRNA upstream 159399 963204 ~ 965902 (-) False G199312
TU270264 lncRNA upstream 159399 963204 ~ 965902 (-) False G199312
XM_039785379.1 mRNA downstream 101120 698921 ~ 701906 (-) True LOC120548861
XM_039786586.1 mRNA downstream 426639 375236 ~ 376387 (-) True LOC120549575
XM_039786548.1 mRNA downstream 792991 7265 ~ 10035 (-) True LOC120549547
XM_039785350.1 mRNA upstream 357875 1161680 ~ 1173622 (-) True LOC120548839
XM_039786655.1 mRNA upstream 396567 1200372 ~ 1200692 (-) True LOC120549623
XM_039785382.1 mRNA upstream 589542 1393347 ~ 1397966 (-) True LOC120548865
XM_039785020.1 mRNA upstream 1258690 2062495 ~ 2093597 (-) False gphb5
XM_039785019.1 mRNA upstream 1258690 2062495 ~ 2091939 (-) False gphb5
TU270158 other downstream 171528 630636 ~ 631498 (-) True G199247
TU270246 other upstream 150202 954007 ~ 958248 (-) True G199305
TU270315 other upstream 286162 1089967 ~ 1090979 (-) True G199358
XR_005637591.1 other upstream 474401 1278206 ~ 1278324 (-) True LOC120550115
XR_005637685.1 other upstream 487947 1291752 ~ 1291870 (-) True LOC120550213
XR_005637487.1 other upstream 488393 1292198 ~ 1292316 (-) True LOC120549995

Expression Profile