RNA id: TU270299



Basic Information


Item Value
RNA id TU270299
length 307
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G199343
representative True

Chromosome Information


Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 1062513 ~ 1062819 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GTCCGAATGTGAGAATTTTGGTCTttcttaaagacaaaacaggaATTCTCTTACCTTTAATTTTGGTGCACCATTTGGATCCGGAGAGAAGAGTCTGAGTGTGTGAAGTCCAGCCAAAAAGTTCTGGTTGGCTTCTGTTGGTTTCCTGGTCTCTGCCTCACGTCGGGGGTCACCatgtaggaaaaaaagcgaccgattctactcttgctcaaaaagccagagtcttttaagaaccaccggtcacttctcaaagtttccccttttcttattgtgttcgttgaaaggcagaccaagaaatgaatactca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU270297 lncRNA downstream 1106 1060956 ~ 1061407 (-) True G199341
TU270296 lncRNA downstream 1656 1060294 ~ 1060857 (-) True G199340
XR_005637428.1 lncRNA downstream 7027 1054580 ~ 1055486 (-) True LOC120549750
TU270289 lncRNA downstream 24755 1037512 ~ 1037758 (-) True G199334
XR_005637233.1 lncRNA downstream 43993 1018090 ~ 1018520 (-) True LOC120548657
TU270303 lncRNA upstream 2570 1065389 ~ 1065603 (-) True G199347
TU270317 lncRNA upstream 27777 1090596 ~ 1090979 (-) False G199358
TU270327 lncRNA upstream 53554 1116373 ~ 1116593 (-) True G199368
XR_005637274.1 lncRNA upstream 476084 1538903 ~ 1539304 (-) False LOC120548741
TU270387 lncRNA upstream 476084 1538903 ~ 1539447 (-) True LOC120548741
XM_039785379.1 mRNA downstream 360607 698921 ~ 701906 (-) True LOC120548861
XM_039786586.1 mRNA downstream 686126 375236 ~ 376387 (-) True LOC120549575
XM_039786548.1 mRNA downstream 1052478 7265 ~ 10035 (-) True LOC120549547
XM_039785350.1 mRNA upstream 98861 1161680 ~ 1173622 (-) True LOC120548839
XM_039786655.1 mRNA upstream 137553 1200372 ~ 1200692 (-) True LOC120549623
XM_039785382.1 mRNA upstream 330528 1393347 ~ 1397966 (-) True LOC120548865
XM_039785020.1 mRNA upstream 999676 2062495 ~ 2093597 (-) False gphb5
XM_039785019.1 mRNA upstream 999676 2062495 ~ 2091939 (-) False gphb5
TU270246 other downstream 104265 954007 ~ 958248 (-) True G199305
TU270158 other downstream 431015 630636 ~ 631498 (-) True G199247
TU270315 other upstream 27148 1089967 ~ 1090979 (-) True G199358
XR_005637591.1 other upstream 215387 1278206 ~ 1278324 (-) True LOC120550115
XR_005637685.1 other upstream 228933 1291752 ~ 1291870 (-) True LOC120550213
XR_005637487.1 other upstream 229379 1292198 ~ 1292316 (-) True LOC120549995
XR_005637504.1 other upstream 258590 1321409 ~ 1321527 (-) True LOC120550013

Expression Profile