RNA id: TU281209


Basic Information

Item Value
RNA id TU281209
length 679
lncRNA type inter_gene
GC content 0.43
exon number 2
gene id G207685
representative True

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 32845885 ~ 32847912 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gataaagaagaacgggacagttgggtttagataaagaagaacgggacagttgggtttagataaagaagaacgggacagttggtttagataaagaagaacggacagttgggtttaggaaaagaagaacgggacagttgggtttaggtaaagatgaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagatgaacgggacagttgggtttagataaagaagaacgggacagttggtttagataaagaagaacgggacagttgggtttagataaagaagaacgggacagttgggtttagataaagaagaacgggacagtgggtttagataaagaagaacgggacagttgggtttagataaagaagaacgggacagttgggtttagataaagaagaacgggacagttggtttagataaagaagaacgggacagttgggtttaggaaaagaagaacggacagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggtttagataaagaagaacgggacagttgggtttaggtaaagaagaacgggacagttgggttttaggaaacgtgacacgtgg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU281213 lncRNA downstream 24604 32758197 ~ 32821281 (-) True G207687
TU281207 lncRNA downstream 28492 32790869 ~ 32817393 (-) True G207684
TU281229 lncRNA downstream 43061 32749130 ~ 32802824 (-) False G207698
TU281228 lncRNA downstream 43061 32801764 ~ 32802824 (-) False G207698
TU281230 lncRNA downstream 43061 32801764 ~ 32802824 (-) True G207698
TU281266 lncRNA upstream 74096 32920745 ~ 32922652 (-) True G207726
TU281283 lncRNA upstream 112046 32958695 ~ 32982724 (-) False G207728
TU281270 lncRNA upstream 133228 32979877 ~ 33038026 (-) True G207728
TU281301 lncRNA upstream 215330 33061979 ~ 33542901 (-) True G207739
TU281302 lncRNA upstream 218021 33064670 ~ 33080983 (-) True G207740
XM_039786993.1 mRNA downstream 154972 32687730 ~ 32690913 (-) True LOC120549825
XM_039786621.1 mRNA downstream 163983 32673953 ~ 32681902 (-) True LOC120549602
XM_039786798.1 mRNA downstream 1868927 30971115 ~ 30976958 (-) False LOC120549706
XM_039786799.1 mRNA downstream 1871452 30971115 ~ 30974433 (-) True LOC120549706
XM_039786796.1 mRNA downstream 1877806 30961020 ~ 30968079 (-) True LOC120549705
XM_039785448.1 mRNA upstream 12910 32859559 ~ 32932010 (-) True LOC120548944
XM_039785449.1 mRNA upstream 114629 32961278 ~ 32964049 (-) True LOC120548945
XM_039785450.1 mRNA upstream 147709 32994358 ~ 33078319 (-) True prkd1
XM_039785015.1 mRNA upstream 457102 33303751 ~ 33305439 (-) True foxg1a
XM_039785451.1 mRNA upstream 476958 33323607 ~ 33460847 (-) True sptbn5
TU281180 other downstream 154000 32609535 ~ 32691885 (-) True G207670
TU281218 other downstream 164030 32673954 ~ 32681855 (-) False LOC120549602
TU280713 other downstream 866125 31975818 ~ 31979760 (-) True G207327
TU280565 other downstream 1662330 31183023 ~ 31183555 (-) True G207202
TU280379 other downstream 2142607 30681927 ~ 30703278 (-) False LOC120549387
TU281264 other upstream 16138 32862787 ~ 32885141 (-) False LOC120548944
TU281288 other upstream 147763 32994412 ~ 33012240 (-) False prkd1
TU281303 other upstream 223612 33070261 ~ 33070727 (-) True G207741
TU281304 other upstream 272239 33118888 ~ 33149293 (-) False G207742
TU281307 other upstream 272239 33118888 ~ 33149293 (-) False G207742

Expression Profile