RNA id: TU281230


Basic Information

Item Value
RNA id TU281230
length 741
lncRNA type inter_gene
GC content 0.48
exon number 2
gene id G207698
representative True

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 32749130 ~ 32802824 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtgtgtgtgtgtgtgtgttacctgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttacctgtgtgtccctgtgtgtccgtgtgtgtgcgtgtgtgcgtgtgtgtgtgtctgtccgtgtgtgtgtctgtatgtctgtccatgtgtgtgtctgtccgtgtgtgtgtctgtatgtctgtccatgtgtgtgtgtgttatctttaaaataattactaattttattatttgtgtgtgtgtgtgtgtgtgtgttacctgcgtgtgtgtgtgagtgtgtgtgtgtgttacctgtgtgtccctgtgtgtccgtgtgtgtgcgtttgtgtgtgtgtgtctgtccgtgtgtgtgtctgtatgtgtgtccatgtgtgtgtgtgttatctttaaaataattactaattttattatttgtgtgtgtgtgtgtgtgtgtccgtgtgtgtgtgtccgtgtgtgtgtgtgtgtgtgtgtgtgtccgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtccgtgtgtgtgtgtgtgtgtgtgtgtgtgtccgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtccgtgtgtgtgtgtgtgtgtgtacctcacATGGCGGCGGTTCAAACTCCAGTCAGCAGCTGGTTGTGCGTACGTGAGAAGAGCTCCATCGTCGGAGTTAACAAGTAACCAGACGGCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU281217 lncRNA downstream 48507 32752839 ~ 32753257 (-) True G207691
TU281216 lncRNA downstream 78572 32678628 ~ 32723192 (-) True G207690
TU281214 lncRNA downstream 94141 32706929 ~ 32707623 (-) True G207688
TU281205 lncRNA downstream 152124 32646697 ~ 32649640 (-) True G207682
TU281203 lncRNA downstream 170351 32622841 ~ 32631413 (-) True G207680
TU281208 lncRNA upstream 43061 32845885 ~ 32847912 (-) False G207685
TU281209 lncRNA upstream 43061 32845885 ~ 32846649 (-) True G207685
TU281266 lncRNA upstream 117921 32920745 ~ 32922652 (-) True G207726
TU281283 lncRNA upstream 155871 32958695 ~ 32982724 (-) False G207728
TU281270 lncRNA upstream 177053 32979877 ~ 33038026 (-) True G207728
XM_039786993.1 mRNA downstream 110851 32687730 ~ 32690913 (-) True LOC120549825
XM_039786621.1 mRNA downstream 119862 32673953 ~ 32681902 (-) True LOC120549602
XM_039786798.1 mRNA downstream 1824806 30971115 ~ 30976958 (-) False LOC120549706
XM_039786799.1 mRNA downstream 1827331 30971115 ~ 30974433 (-) True LOC120549706
XM_039786796.1 mRNA downstream 1833685 30961020 ~ 30968079 (-) True LOC120549705
XM_039785448.1 mRNA upstream 56735 32859559 ~ 32932010 (-) True LOC120548944
XM_039785449.1 mRNA upstream 158454 32961278 ~ 32964049 (-) True LOC120548945
XM_039785450.1 mRNA upstream 191534 32994358 ~ 33078319 (-) True prkd1
XM_039785015.1 mRNA upstream 500927 33303751 ~ 33305439 (-) True foxg1a
XM_039785451.1 mRNA upstream 520783 33323607 ~ 33460847 (-) True sptbn5
TU281180 other downstream 109879 32609535 ~ 32691885 (-) True G207670
TU281218 other downstream 119909 32673954 ~ 32681855 (-) False LOC120549602
TU280713 other downstream 822004 31975818 ~ 31979760 (-) True G207327
TU280565 other downstream 1618209 31183023 ~ 31183555 (-) True G207202
TU280379 other downstream 2098486 30681927 ~ 30703278 (-) False LOC120549387
TU281264 other upstream 59963 32862787 ~ 32885141 (-) False LOC120548944
TU281288 other upstream 191588 32994412 ~ 33012240 (-) False prkd1
TU281303 other upstream 267437 33070261 ~ 33070727 (-) True G207741
TU281304 other upstream 316064 33118888 ~ 33149293 (-) False G207742
TU281307 other upstream 316064 33118888 ~ 33149293 (-) False G207742

Expression Profile