RNA id: TU281304



Basic Information


Item Value
RNA id TU281304
length 589
RNA type TUCP
GC content 0.49
exon number 4
gene id G207742
representative False

Chromosome Information


Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 33094185 ~ 33149293 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gtgtgtctgtttgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctatgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctatgtgtgtgtgtctctgtctgtctgtctctgtgtgtctgtttgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctatgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtctgtctgtctgtgtgtgtgtgtctgtctgtctgtctctgtctgtctgtctctgtgtgtgtgtctctgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtctgtctctgtgtgtgtgtctctgtgtgtgtctctgtgtgtgtctgtctctgtgtgtgtgtctctgtgtgtgtctctgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtctctgtgtgtgtgtctgtctctgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtctgtctctgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU281302 lncRNA downstream 37905 33064670 ~ 33080983 (-) True G207740
TU281270 lncRNA downstream 80862 32979877 ~ 33038026 (-) True G207728
TU281283 lncRNA downstream 136164 32958695 ~ 32982724 (-) False G207728
TU281266 lncRNA downstream 196236 32920745 ~ 32922652 (-) True G207726
TU281208 lncRNA downstream 270976 32845885 ~ 32847912 (-) False G207685
TU281322 lncRNA upstream 988 33150281 ~ 33218504 (-) False G207747
TU281321 lncRNA upstream 15712 33165005 ~ 33218504 (-) False G207747
TU281327 lncRNA upstream 22837 33172130 ~ 33172563 (-) True G207749
TU281328 lncRNA upstream 28102 33177395 ~ 33177727 (-) True G207750
TU281317 lncRNA upstream 43496 33192789 ~ 33214817 (-) False G207747
XM_039785450.1 mRNA downstream 40569 32994358 ~ 33078319 (-) True prkd1
XM_039785449.1 mRNA downstream 154839 32961278 ~ 32964049 (-) True LOC120548945
XM_039785448.1 mRNA downstream 186878 32859559 ~ 32932010 (-) True LOC120548944
XM_039786993.1 mRNA downstream 427975 32687730 ~ 32690913 (-) True LOC120549825
XM_039786621.1 mRNA downstream 436986 32673953 ~ 32681902 (-) True LOC120549602
XM_039785015.1 mRNA upstream 154458 33303751 ~ 33305439 (-) True foxg1a
XM_039785451.1 mRNA upstream 174314 33323607 ~ 33460847 (-) True sptbn5
XM_039785993.1 mRNA upstream 359315 33508608 ~ 33524752 (-) True LOC120549249
XM_039785994.1 mRNA upstream 383194 33532487 ~ 33581461 (-) True ehd4
XM_039785129.1 mRNA upstream 444775 33594068 ~ 33623644 (-) True coch
TU281303 other downstream 48161 33070261 ~ 33070727 (-) True G207741
TU281288 other downstream 106648 32994412 ~ 33012240 (-) False prkd1
TU281264 other downstream 233747 32862787 ~ 32885141 (-) False LOC120548944
TU281180 other downstream 427003 32609535 ~ 32691885 (-) True G207670
TU281218 other downstream 437033 32673954 ~ 32681855 (-) False LOC120549602
TU281405 other upstream 342280 33491573 ~ 33498532 (-) True G207802
TU281412 other upstream 384184 33533477 ~ 33611751 (-) True G207808
TU281419 other upstream 431731 33581024 ~ 33647324 (-) False ehd4
TU281464 other upstream 570192 33719485 ~ 33731941 (-) False g2e3
TU281431 other upstream 623084 33772377 ~ 33846497 (-) False strn3

Expression Profile