RNA id: TU281318



Basic Information


Item Value
RNA id TU281318
length 506
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G207747
representative True

Chromosome Information


Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 33150281 ~ 33254663 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ttgtatacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacagacacacacacacagacagacacagacacacacacacacacacacacacacagacacacacacacagacagacacagacacacacacacacacacacacacacacagagacacacacacacagacacacacacagacacacacacacacagacacacacacacagacagacacagacacacacacacacacacacagacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacatacacacacacacacaaacacacatacacacacacacacacacacacacac

Function


GO: NA

KEGG: NA

JBrowse2


Loading

Neighbor


RNA id RNA type direction distance location representative gene id
TU281328 lncRNA downstream 15062 33177395 ~ 33177727 (-) True G207750
TU281327 lncRNA downstream 20226 33172130 ~ 33172563 (-) True G207749
TU281305 lncRNA downstream 43496 33094185 ~ 33149293 (-) False G207742
TU281302 lncRNA downstream 111806 33064670 ~ 33080983 (-) True G207740
TU281270 lncRNA downstream 154763 32979877 ~ 33038026 (-) True G207728
TU281336 lncRNA upstream 7503 33208295 ~ 33254206 (-) True G207756
TU281323 lncRNA upstream 17342 33218134 ~ 33218504 (-) False G207747
TU281333 lncRNA upstream 25040 33225832 ~ 33284747 (-) False G207755
TU281353 lncRNA upstream 112810 33313602 ~ 33314976 (-) True G207766
TU281355 lncRNA upstream 118160 33318952 ~ 33362302 (-) True G207767
XM_039785450.1 mRNA downstream 114470 32994358 ~ 33078319 (-) True prkd1
XM_039785449.1 mRNA downstream 228740 32961278 ~ 32964049 (-) True LOC120548945
XM_039785448.1 mRNA downstream 260779 32859559 ~ 32932010 (-) True LOC120548944
XM_039786993.1 mRNA downstream 501876 32687730 ~ 32690913 (-) True LOC120549825
XM_039786621.1 mRNA downstream 510887 32673953 ~ 32681902 (-) True LOC120549602
XM_039785015.1 mRNA upstream 102959 33303751 ~ 33305439 (-) True foxg1a
XM_039785451.1 mRNA upstream 122815 33323607 ~ 33460847 (-) True sptbn5
XM_039785993.1 mRNA upstream 307816 33508608 ~ 33524752 (-) True LOC120549249
XM_039785994.1 mRNA upstream 331695 33532487 ~ 33581461 (-) True ehd4
XM_039785129.1 mRNA upstream 393276 33594068 ~ 33623644 (-) True coch
TU281304 other downstream 43496 33118888 ~ 33149293 (-) False G207742
TU281307 other downstream 43496 33118888 ~ 33149293 (-) False G207742
TU281306 other downstream 43496 33148146 ~ 33149293 (-) True G207742
TU281303 other downstream 122062 33070261 ~ 33070727 (-) True G207741
TU281288 other downstream 180549 32994412 ~ 33012240 (-) False prkd1
TU281405 other upstream 290781 33491573 ~ 33498532 (-) True G207802
TU281412 other upstream 332685 33533477 ~ 33611751 (-) True G207808
TU281419 other upstream 380232 33581024 ~ 33647324 (-) False ehd4
TU281464 other upstream 518693 33719485 ~ 33731941 (-) False g2e3
TU281431 other upstream 571585 33772377 ~ 33846497 (-) False strn3

Expression Profile


TU281318 Expression in all Baseline Samples

Bar chart with 13 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 5.
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TU281318 Expression in each Bioproject

Bar chart with 8 bars.
TU281318 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
End of interactive chart.