RNA id: TU281353


Basic Information

Item Value
RNA id TU281353
length 619
lncRNA type inter_gene
GC content 0.53
exon number 3
gene id G207766
representative True

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 33313602 ~ 33314976 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtgttgcaccggactaaaacgatgcatgcacaaaaaatgcgttggcccacctatctacagctaggggagaccccacctatctacagctagaggagacctcacctatctacagctagaggagacctcacctatctacagctagaggagaccccacctatctacagctagaggagaccccacctatctacagctaggggagacctcacctatctacagctagaggagacctcacctatctacagctagaggagaccccacctatctacagctagaggagacctcacctatctacagctagaggagaccccacctatctacagctaggggagaccctacctatctacagctagaggagaccccacctatctacagctagaggagacctcacctatctacagctagaggagacctcacctatctacagctagaggagaccccacctatctacagctagaggagaccccacctatctacagctagaggagacctcacctatctacagctagaggagaccccacctatctacagctagaggagaccccacctatctccagctagaggagaccccacctatctacagctagaggagaccccacctatctacagctagaggagacag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU281334 lncRNA downstream 28855 33196434 ~ 33284747 (-) True G207755
TU281333 lncRNA downstream 28855 33225832 ~ 33284747 (-) False G207755
TU281319 lncRNA downstream 58939 33192789 ~ 33254663 (-) False G207747
TU281336 lncRNA downstream 59396 33208295 ~ 33254206 (-) True G207756
TU281322 lncRNA downstream 95098 33150281 ~ 33218504 (-) False G207747
TU281355 lncRNA upstream 3976 33318952 ~ 33362302 (-) True G207767
TU281356 lncRNA upstream 5808 33320784 ~ 33323023 (-) True G207768
TU281373 lncRNA upstream 51421 33366397 ~ 33446959 (-) False G207776
TU281375 lncRNA upstream 52082 33367058 ~ 33375800 (-) True G207778
TU281378 lncRNA upstream 55300 33370276 ~ 33370696 (-) True G207780
XM_039785015.1 mRNA downstream 8163 33303751 ~ 33305439 (-) True foxg1a
XM_039785450.1 mRNA downstream 235283 32994358 ~ 33078319 (-) True prkd1
XM_039785449.1 mRNA downstream 349553 32961278 ~ 32964049 (-) True LOC120548945
XM_039785448.1 mRNA downstream 381592 32859559 ~ 32932010 (-) True LOC120548944
XM_039786993.1 mRNA downstream 622689 32687730 ~ 32690913 (-) True LOC120549825
XM_039785451.1 mRNA upstream 8631 33323607 ~ 33460847 (-) True sptbn5
XM_039785993.1 mRNA upstream 193632 33508608 ~ 33524752 (-) True LOC120549249
XM_039785994.1 mRNA upstream 217511 33532487 ~ 33581461 (-) True ehd4
XM_039785129.1 mRNA upstream 279092 33594068 ~ 33623644 (-) True coch
XM_039785452.1 mRNA upstream 318003 33632979 ~ 33702514 (-) True scfd1
TU281304 other downstream 164309 33118888 ~ 33149293 (-) False G207742
TU281307 other downstream 164309 33118888 ~ 33149293 (-) False G207742
TU281306 other downstream 164309 33148146 ~ 33149293 (-) True G207742
TU281303 other downstream 242875 33070261 ~ 33070727 (-) True G207741
TU281288 other downstream 301362 32994412 ~ 33012240 (-) False prkd1
TU281405 other upstream 176597 33491573 ~ 33498532 (-) True G207802
TU281412 other upstream 218501 33533477 ~ 33611751 (-) True G207808
TU281419 other upstream 266048 33581024 ~ 33647324 (-) False ehd4
TU281464 other upstream 404509 33719485 ~ 33731941 (-) False g2e3
TU281431 other upstream 457401 33772377 ~ 33846497 (-) False strn3

Expression Profile