RNA id: TU281355



Basic Information


Item Value
RNA id TU281355
length 203
lncRNA type sense_over
GC content 0.51
exon number 2
gene id G207767
representative True

Chromosome Information


Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 33318952 ~ 33362302 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gcacacacacacacacacacacacacacacagacacacacacacacacacacagacacacagacacacagacacacagacacacacacacacacacacacacacacacactcactccccaccaacacacacactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU281353 lncRNA downstream 3976 33313602 ~ 33314976 (-) True G207766
TU281334 lncRNA downstream 34205 33196434 ~ 33284747 (-) True G207755
TU281333 lncRNA downstream 34205 33225832 ~ 33284747 (-) False G207755
TU281319 lncRNA downstream 64289 33192789 ~ 33254663 (-) False G207747
TU281336 lncRNA downstream 64746 33208295 ~ 33254206 (-) True G207756
TU281373 lncRNA upstream 4095 33366397 ~ 33446959 (-) False G207776
TU281375 lncRNA upstream 4756 33367058 ~ 33375800 (-) True G207778
TU281378 lncRNA upstream 7974 33370276 ~ 33370696 (-) True G207780
TU281379 lncRNA upstream 11082 33373384 ~ 33376194 (-) True G207781
TU281388 lncRNA upstream 72917 33435219 ~ 33435643 (-) True G207788
XM_039785015.1 mRNA downstream 13513 33303751 ~ 33305439 (-) True foxg1a
XM_039785450.1 mRNA downstream 240633 32994358 ~ 33078319 (-) True prkd1
XM_039785449.1 mRNA downstream 354903 32961278 ~ 32964049 (-) True LOC120548945
XM_039785448.1 mRNA downstream 386942 32859559 ~ 32932010 (-) True LOC120548944
XM_039786993.1 mRNA downstream 628039 32687730 ~ 32690913 (-) True LOC120549825
XM_039785993.1 mRNA upstream 146306 33508608 ~ 33524752 (-) True LOC120549249
XM_039785994.1 mRNA upstream 170185 33532487 ~ 33581461 (-) True ehd4
XM_039785129.1 mRNA upstream 231766 33594068 ~ 33623644 (-) True coch
XM_039785452.1 mRNA upstream 270677 33632979 ~ 33702514 (-) True scfd1
XM_039785094.1 mRNA upstream 347561 33709863 ~ 33731941 (-) True g2e3
TU281304 other downstream 169659 33118888 ~ 33149293 (-) False G207742
TU281307 other downstream 169659 33118888 ~ 33149293 (-) False G207742
TU281306 other downstream 169659 33148146 ~ 33149293 (-) True G207742
TU281303 other downstream 248225 33070261 ~ 33070727 (-) True G207741
TU281288 other downstream 306712 32994412 ~ 33012240 (-) False prkd1
TU281405 other upstream 129271 33491573 ~ 33498532 (-) True G207802
TU281412 other upstream 171175 33533477 ~ 33611751 (-) True G207808
TU281419 other upstream 218722 33581024 ~ 33647324 (-) False ehd4
TU281464 other upstream 357183 33719485 ~ 33731941 (-) False g2e3
TU281431 other upstream 410075 33772377 ~ 33846497 (-) False strn3

Expression Profile