RNA id: TU281405



Basic Information


Item Value
RNA id TU281405
length 479
RNA type TUCP
GC content 0.51
exon number 2
gene id G207802
representative True

Chromosome Information


Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 33491573 ~ 33498532 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GCGTCTGGGATACGATAAGCAGCTTTTCCTCTTACGAACTGAGGATGTGGACCTTAATGGGTTGACATCGTTCTACAACTCTGTGCTGCAGGCGTGGCAGGTACTCCAATATTCTCGGGATGTAAAGGAAACTCCAGGAATGTGGCTTTTTGAAGAACCGTTGTTTTTCAACAACTTCCTGGGGACTCGAACATTGCAGTCAGCCAGCCTGAGGGCCAGTCTCAGAGAGGCTGGCTGTACTAAATTGGGTCACCTGATGAAGATGACTGCAATCTCTGTTGATGTGCTAAGAGTGAGGAGCAACATCACCTCTAGTAGGTTGATCGACAGGGTGGTGAAAGAAGTTTGTGCTGCCCTGGGACCACCCCAGCGAACTCTTGTAGAGAATCGGTCACTGTGTGAGCAGTGGAGTGACGGATGGGAGTACAGTTTCCCCTCTCTGACCATCACCCCATCTGTGGGGGGGATGGCAGGAGGAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU281394 lncRNA downstream 3153 33478983 ~ 33488420 (-) True G207794
TU281373 lncRNA downstream 44614 33366397 ~ 33446959 (-) False G207776
TU281368 lncRNA downstream 45604 33444269 ~ 33445969 (-) True G207776
TU281367 lncRNA downstream 45604 33445555 ~ 33445969 (-) False G207776
TU281388 lncRNA downstream 55930 33435219 ~ 33435643 (-) True G207788
TU281415 lncRNA upstream 51231 33549763 ~ 33571433 (-) True G207809
TU281404 lncRNA upstream 148169 33646701 ~ 33683064 (-) True G207801
TU281395 lncRNA upstream 176381 33674913 ~ 33679837 (-) False scfd1
TU281425 lncRNA upstream 187040 33685572 ~ 33686916 (-) True G207817
TU281429 lncRNA upstream 200644 33699176 ~ 33702742 (-) False scfd1
XM_039785451.1 mRNA downstream 30726 33323607 ~ 33460847 (-) True sptbn5
XM_039785015.1 mRNA downstream 186134 33303751 ~ 33305439 (-) True foxg1a
XM_039785450.1 mRNA downstream 413254 32994358 ~ 33078319 (-) True prkd1
XM_039785449.1 mRNA downstream 527524 32961278 ~ 32964049 (-) True LOC120548945
XM_039785448.1 mRNA downstream 559563 32859559 ~ 32932010 (-) True LOC120548944
XM_039785993.1 mRNA upstream 10076 33508608 ~ 33524752 (-) True LOC120549249
XM_039785994.1 mRNA upstream 33955 33532487 ~ 33581461 (-) True ehd4
XM_039785129.1 mRNA upstream 95536 33594068 ~ 33623644 (-) True coch
XM_039785452.1 mRNA upstream 134447 33632979 ~ 33702514 (-) True scfd1
XM_039785094.1 mRNA upstream 211331 33709863 ~ 33731941 (-) True g2e3
TU281304 other downstream 342280 33118888 ~ 33149293 (-) False G207742
TU281307 other downstream 342280 33118888 ~ 33149293 (-) False G207742
TU281306 other downstream 342280 33148146 ~ 33149293 (-) True G207742
TU281303 other downstream 420846 33070261 ~ 33070727 (-) True G207741
TU281288 other downstream 479333 32994412 ~ 33012240 (-) False prkd1
TU281412 other upstream 34945 33533477 ~ 33611751 (-) True G207808
TU281419 other upstream 82492 33581024 ~ 33647324 (-) False ehd4
TU281464 other upstream 220953 33719485 ~ 33731941 (-) False g2e3
TU281431 other upstream 273845 33772377 ~ 33846497 (-) False strn3
TU281435 other upstream 273845 33772377 ~ 33884726 (-) False strn3

Expression Profile