RNA id: TU281412


Basic Information

Item Value
RNA id TU281412
length 664
RNA type TUCP
GC content 0.50
exon number 2
gene id G207808
representative True

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 33533477 ~ 33611751 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtctttgtgtgtctgtgtgtgtctgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgctgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtctctctgtgtgtctgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtctctgtgtgtctctctgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgggtgtgtgtgtgtgtgtctgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtctgtgtgtgtgtgtgtgtgtttgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttgttctgtatgcgtgtgtgtgtgtgtgtgtgctctgtgtgtgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtccgtgtgtgtgt

Function

GO: NA

KEGG:

id description
ko04151 PI3K-Akt signaling pathway
ko04512 ECM-receptor interaction
ko04510 Focal adhesion
ko04974 Protein digestion and absorption
ko05165 Human papillomavirus infection

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU281394 lncRNA downstream 45057 33478983 ~ 33488420 (-) True G207794
TU281373 lncRNA downstream 86518 33366397 ~ 33446959 (-) False G207776
TU281368 lncRNA downstream 87508 33444269 ~ 33445969 (-) True G207776
TU281367 lncRNA downstream 87508 33445555 ~ 33445969 (-) False G207776
TU281388 lncRNA downstream 97834 33435219 ~ 33435643 (-) True G207788
TU281404 lncRNA upstream 34950 33646701 ~ 33683064 (-) True G207801
TU281395 lncRNA upstream 63162 33674913 ~ 33679837 (-) False scfd1
TU281425 lncRNA upstream 73821 33685572 ~ 33686916 (-) True G207817
TU281429 lncRNA upstream 87425 33699176 ~ 33702742 (-) False scfd1
TU281455 lncRNA upstream 93229 33704980 ~ 33705588 (-) True G207824
XM_039785993.1 mRNA downstream 8725 33508608 ~ 33524752 (-) True LOC120549249
XM_039785451.1 mRNA downstream 72630 33323607 ~ 33460847 (-) True sptbn5
XM_039785015.1 mRNA downstream 228038 33303751 ~ 33305439 (-) True foxg1a
XM_039785450.1 mRNA downstream 455158 32994358 ~ 33078319 (-) True prkd1
XM_039785449.1 mRNA downstream 569428 32961278 ~ 32964049 (-) True LOC120548945
XM_039785452.1 mRNA upstream 21228 33632979 ~ 33702514 (-) True scfd1
XM_039785094.1 mRNA upstream 98112 33709863 ~ 33731941 (-) True g2e3
XM_039785454.1 mRNA upstream 160588 33772339 ~ 33818299 (-) False strn3
XM_039785456.1 mRNA upstream 219436 33831187 ~ 33904023 (-) True hectd1
XM_039786103.1 mRNA upstream 309095 33920846 ~ 33924487 (-) True LOC120549293
TU281405 other downstream 34945 33491573 ~ 33498532 (-) True G207802
TU281304 other downstream 384184 33118888 ~ 33149293 (-) False G207742
TU281307 other downstream 384184 33118888 ~ 33149293 (-) False G207742
TU281306 other downstream 384184 33148146 ~ 33149293 (-) True G207742
TU281303 other downstream 462750 33070261 ~ 33070727 (-) True G207741
TU281464 other upstream 107734 33719485 ~ 33731941 (-) False g2e3
TU281431 other upstream 160626 33772377 ~ 33846497 (-) False strn3
TU281435 other upstream 160626 33772377 ~ 33884726 (-) False strn3
TU281436 other upstream 160626 33772377 ~ 33846497 (-) False strn3
TU281439 other upstream 160626 33772377 ~ 33777317 (-) False strn3

Expression Profile