RNA id: XR_005637542.1



Basic Information


Item Value
RNA id XR_005637542.1
length 119
RNA type rRNA
GC content 0.57
exon number 1
gene id LOC120550055
representative True

Chromosome Information


Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 1445313 ~ 1445431 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gctaacggccataccaccgtgaacacgcccgatctcgtttgatctcggaagctaagcaaggtagggccgggtcagtacttggatgggagactgcctgggaatacccggtgctgtaagct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU270327 lncRNA downstream 328720 1116373 ~ 1116593 (-) True G199368
TU270317 lncRNA downstream 354334 1090596 ~ 1090979 (-) False G199358
TU270303 lncRNA downstream 379710 1065389 ~ 1065603 (-) True G199347
TU270299 lncRNA downstream 382494 1062513 ~ 1062819 (-) True G199343
TU270297 lncRNA downstream 383906 1060956 ~ 1061407 (-) True G199341
XR_005637274.1 lncRNA upstream 93472 1538903 ~ 1539304 (-) False LOC120548741
TU270387 lncRNA upstream 93472 1538903 ~ 1539447 (-) True LOC120548741
TU270388 lncRNA upstream 93472 1538903 ~ 1539447 (-) False LOC120548741
TU270390 lncRNA upstream 93472 1538903 ~ 1545508 (-) False LOC120548741
TU270416 lncRNA upstream 252615 1698046 ~ 1698258 (-) True G199448
XM_039785382.1 mRNA downstream 47347 1393347 ~ 1397966 (-) True LOC120548865
XM_039786655.1 mRNA downstream 244621 1200372 ~ 1200692 (-) True LOC120549623
XM_039785350.1 mRNA downstream 271691 1161680 ~ 1173622 (-) True LOC120548839
XM_039785379.1 mRNA downstream 743407 698921 ~ 701906 (-) True LOC120548861
XM_039786586.1 mRNA downstream 1068926 375236 ~ 376387 (-) True LOC120549575
XM_039785020.1 mRNA upstream 617064 2062495 ~ 2093597 (-) False gphb5
XM_039785019.1 mRNA upstream 617064 2062495 ~ 2091939 (-) False gphb5
XM_039785021.1 mRNA upstream 627191 2072622 ~ 2091939 (-) True gphb5
XM_039785388.1 mRNA upstream 744931 2190362 ~ 2191816 (-) True LOC120548872
XM_039785392.1 mRNA upstream 1008842 2454273 ~ 2461461 (-) True LOC120548877
XR_005637670.1 other downstream 117909 1327286 ~ 1327404 (-) True LOC120550197
XR_005637679.1 other downstream 123564 1321632 ~ 1321749 (-) True LOC120550207
XR_005637504.1 other downstream 123786 1321409 ~ 1321527 (-) True LOC120550013
XR_005637487.1 other downstream 152997 1292198 ~ 1292316 (-) True LOC120549995
XR_005637685.1 other downstream 153443 1291752 ~ 1291870 (-) True LOC120550213
XR_005637671.1 other upstream 1454 1446885 ~ 1447003 (-) True LOC120550198
XR_005637457.1 other upstream 2113 1447544 ~ 1447662 (-) True LOC120549948
XR_005637686.1 other upstream 2564 1447995 ~ 1448113 (-) True LOC120550214
XR_005637642.1 other upstream 3010 1448441 ~ 1448559 (-) True LOC120550167
XR_005637675.1 other upstream 3687 1449118 ~ 1449238 (-) True LOC120550202

Expression Profile