RNA id: XR_005637685.1



Basic Information


Item Value
RNA id XR_005637685.1
length 119
RNA type rRNA
GC content 0.54
exon number 1
gene id LOC120550213
representative True

Chromosome Information


Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 1291752 ~ 1291870 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gcttacggccataccaccctgaacacgcccgatctagtttgatctcggaagctaagcaaggtagggccgagtcagtacttggatgggagactacCTGGGAATACCTGGTGCTGTAAGCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU270327 lncRNA downstream 175159 1116373 ~ 1116593 (-) True G199368
TU270317 lncRNA downstream 200773 1090596 ~ 1090979 (-) False G199358
TU270303 lncRNA downstream 226149 1065389 ~ 1065603 (-) True G199347
TU270299 lncRNA downstream 228933 1062513 ~ 1062819 (-) True G199343
TU270297 lncRNA downstream 230345 1060956 ~ 1061407 (-) True G199341
XR_005637274.1 lncRNA upstream 247033 1538903 ~ 1539304 (-) False LOC120548741
TU270387 lncRNA upstream 247033 1538903 ~ 1539447 (-) True LOC120548741
TU270388 lncRNA upstream 247033 1538903 ~ 1539447 (-) False LOC120548741
TU270390 lncRNA upstream 247033 1538903 ~ 1545508 (-) False LOC120548741
TU270416 lncRNA upstream 406176 1698046 ~ 1698258 (-) True G199448
XM_039786655.1 mRNA downstream 91060 1200372 ~ 1200692 (-) True LOC120549623
XM_039785350.1 mRNA downstream 118130 1161680 ~ 1173622 (-) True LOC120548839
XM_039785379.1 mRNA downstream 589846 698921 ~ 701906 (-) True LOC120548861
XM_039786586.1 mRNA downstream 915365 375236 ~ 376387 (-) True LOC120549575
XM_039786548.1 mRNA downstream 1281717 7265 ~ 10035 (-) True LOC120549547
XM_039785382.1 mRNA upstream 101477 1393347 ~ 1397966 (-) True LOC120548865
XM_039785020.1 mRNA upstream 770625 2062495 ~ 2093597 (-) False gphb5
XM_039785019.1 mRNA upstream 770625 2062495 ~ 2091939 (-) False gphb5
XM_039785021.1 mRNA upstream 780752 2072622 ~ 2091939 (-) True gphb5
XM_039785388.1 mRNA upstream 898492 2190362 ~ 2191816 (-) True LOC120548872
XR_005637591.1 other downstream 13428 1278206 ~ 1278324 (-) True LOC120550115
TU270315 other downstream 200773 1089967 ~ 1090979 (-) True G199358
TU270246 other downstream 333504 954007 ~ 958248 (-) True G199305
TU270158 other downstream 660254 630636 ~ 631498 (-) True G199247
XR_005637487.1 other upstream 328 1292198 ~ 1292316 (-) True LOC120549995
XR_005637504.1 other upstream 29539 1321409 ~ 1321527 (-) True LOC120550013
XR_005637679.1 other upstream 29762 1321632 ~ 1321749 (-) True LOC120550207
XR_005637670.1 other upstream 35416 1327286 ~ 1327404 (-) True LOC120550197
XR_005637542.1 other upstream 153443 1445313 ~ 1445431 (-) True LOC120550055